Amplicon details

Amplicon:

195 bp
1     gctcctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51    ctctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgacatctc cactgacgta agggatgacg cacaatccca ctatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725224.1 nt Gateway expression vector pAGRIKOLA... 9497 bp Gateway expression vector pAGRIKOLA-CATMA3a09620 QL-ELE-00-001 195 bp View
DQ995484.1 nt Overexpression vector pFE12860OE, c... 7022 bp Overexpression vector pFE12860OE QL-ELE-00-001 195 bp View
LT725225.1 nt Gateway expression vector pAGRIKOLA... 9697 bp Gateway expression vector pAGRIKOLA-CATMA3a09630 QL-ELE-00-001 195 bp View
LT724704.1 nt Gateway expression vector pAGRIKOLA... 9449 bp Gateway expression vector pAGRIKOLA-CATMA1a00190 QL-ELE-00-001 195 bp View
LT725589.1 nt Gateway expression vector pAGRIKOLA... 9461 bp Gateway expression vector pAGRIKOLA-CATMA5a42890 QL-ELE-00-001 195 bp View
LT725227.1 nt Gateway expression vector pAGRIKOLA... 9507 bp Gateway expression vector pAGRIKOLA-CATMA3a11120 QL-ELE-00-001 195 bp View
LT725228.1 nt Gateway expression vector pAGRIKOLA... 9533 bp Gateway expression vector pAGRIKOLA-CATMA3a12660 QL-ELE-00-001 195 bp View
LT724705.1 nt Gateway expression vector pAGRIKOLA... 9571 bp Gateway expression vector pAGRIKOLA-CATMA1a01040 QL-ELE-00-001 195 bp View
LT725229.1 nt Gateway expression vector pAGRIKOLA... 9479 bp Gateway expression vector pAGRIKOLA-CATMA3a13020 QL-ELE-00-001 195 bp View
LT725172.1 nt Gateway expression vector pAGRIKOLA... 9535 bp Gateway expression vector pAGRIKOLA-CATMA2a41570 QL-ELE-00-001 195 bp View
LT725230.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA3a13050 QL-ELE-00-001 195 bp View
LT724706.1 nt Gateway expression vector pAGRIKOLA... 9647 bp Gateway expression vector pAGRIKOLA-CATMA1a01130 QL-ELE-00-001 195 bp View
LT725231.1 nt Gateway expression vector pAGRIKOLA... 9635 bp Gateway expression vector pAGRIKOLA-CATMA3a13250 QL-ELE-00-001 195 bp View
LT725598.1 nt Gateway expression vector pAGRIKOLA... 9821 bp Gateway expression vector pAGRIKOLA-CATMA5a44746 QL-ELE-00-001 195 bp View
LT725232.1 nt Gateway expression vector pAGRIKOLA... 9547 bp Gateway expression vector pAGRIKOLA-CATMA3a13510 QL-ELE-00-001 195 bp View
LT724707.1 nt Gateway expression vector pAGRIKOLA... 9531 bp Gateway expression vector pAGRIKOLA-CATMA1a01200 QL-ELE-00-001 195 bp View
LT725233.1 nt Gateway expression vector pAGRIKOLA... 9497 bp Gateway expression vector pAGRIKOLA-CATMA3a14270 QL-ELE-00-001 195 bp View
NRN_GZ594072 nrnl1 Sequence 67 from patent US 8309794. 4510 bp unidentified QL-ELE-00-001 195 bp View
LT725234.1 nt Gateway expression vector pAGRIKOLA... 9515 bp Gateway expression vector pAGRIKOLA-CATMA3a15520 QL-ELE-00-001 195 bp View
JC007642.1 emblrelpat Sequence 7 from Patent EP2647715. 10627 bp synthetic construct QL-ELE-00-001 195 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.