Amplicon details

Amplicon:

195 bp
1     gctcctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51    ctctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgacatctc cactgacgta agggatgacg cacaatccca ctatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KP171167.1 nt Binary vector pYBA-1337, complete s... 6299 bp Binary vector pYBA-1337 QL-ELE-00-001 195 bp View
KP171168.1 nt Binary vector pYBA-1338, complete s... 6314 bp Binary vector pYBA-1338 QL-ELE-00-001 195 bp View
KP171169.1 nt Binary vector pYBA-1339, complete s... 7256 bp Binary vector pYBA-1339 QL-ELE-00-001 195 bp View
HF949362.1 nt Boechera divaricarpa GSS, clone B59... 1153 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
HF950140.1 nt Boechera divaricarpa GSS, clone B53... 1199 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
HF950541.1 nt Boechera divaricarpa GSS, clone B53... 1175 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
HF951363.1 nt Boechera divaricarpa GSS, clone B62... 1145 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
JF909478.1 nt Cloning vector pPLV25, complete seq... 6042 bp Cloning vector pPLV25 QL-ELE-00-001 195 bp View
MH397716.1 nt Plant Stable Overexpression Vector ... 9359 bp Plant Stable Overexpression Vector pRHVnGFP QL-ELE-00-001 195 bp View
JF909480.1 nt Cloning vector pPLV27, complete seq... 6750 bp Cloning vector pPLV27 QL-ELE-00-001 195 bp View
MH397718.1 nt Plant Stable Overexpression Vector ... 8805 bp Plant Stable Overexpression Vector pRHVcMyc QL-ELE-00-001 195 bp View
NRN_JA765420 nrnl1 Sequence 1 from Patent EP2418283. ... 3047 bp unidentified QL-ELE-00-001 195 bp View
NRN_CQ894856 nrnl1 Sequence 24 from Patent WO200409014... 12987 bp unidentified QL-ELE-00-001 195 bp View
MH423063.1 nt Plant Stable Expression Vector pRGE... 6619 bp Plant Stable Expression Vector pRGEcMyc QL-ELE-00-001 195 bp View
MK863362.1 nt Plant binary expression vector pNC-... 14245 bp Plant binary expression vector pNC-BiFC-VD4 QL-ELE-00-001 195 bp View
MK863363.1 nt Plant binary expression vector pNC-... 11178 bp Plant binary expression vector pNC-BiFC-Vnc pNC-BiFC-Vnc QL-ELE-00-001 195 bp View
LT724709.1 nt Gateway expression vector pAGRIKOLA... 9923 bp Gateway expression vector pAGRIKOLA-CATMA1a01330 QL-ELE-00-001 195 bp View
MH450168.1 nt Plant Stable Overexpression Vector ... 8540 bp Plant Stable Overexpression Vector pRGVcHA QL-ELE-00-001 195 bp View
LT724718.1 nt Gateway expression vector pAGRIKOLA... 9499 bp Gateway expression vector pAGRIKOLA-CATMA1a03640 QL-ELE-00-001 195 bp View
LT724917.1 nt Gateway expression vector pAGRIKOLA... 9667 bp Gateway expression vector pAGRIKOLA-CATMA2a00475 QL-ELE-00-001 195 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.