Amplicon details

Amplicon:

195 bp
1     gctcctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51    ctctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgacatctc cactgacgta agggatgacg cacaatccca ctatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725382.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA4a18470 QL-ELE-00-001 195 bp View
LT725127.1 nt Gateway expression vector pAGRIKOLA... 9505 bp Gateway expression vector pAGRIKOLA-CATMA2a31720 QL-ELE-00-001 195 bp View
HF951329.1 nt Boechera divaricarpa GSS, clone B62... 1140 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT725128.1 nt Gateway expression vector pAGRIKOLA... 9829 bp Gateway expression vector pAGRIKOLA-CATMA2a31870 QL-ELE-00-001 195 bp View
LT724754.1 nt Gateway expression vector pAGRIKOLA... 9565 bp Gateway expression vector pAGRIKOLA-CATMA1a18530 QL-ELE-00-001 195 bp View
LT725129.1 nt Gateway expression vector pAGRIKOLA... 9489 bp Gateway expression vector pAGRIKOLA-CATMA2a32005 QL-ELE-00-001 195 bp View
LT725391.1 nt Gateway expression vector pAGRIKOLA... 9647 bp Gateway expression vector pAGRIKOLA-CATMA4a18635 QL-ELE-00-001 195 bp View
LT725130.1 nt Gateway expression vector pAGRIKOLA... 9459 bp Gateway expression vector pAGRIKOLA-CATMA2a32085 QL-ELE-00-001 195 bp View
HF951365.1 nt Boechera divaricarpa GSS, clone B62... 1162 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT725131.1 nt Gateway expression vector pAGRIKOLA... 9937 bp Gateway expression vector pAGRIKOLA-CATMA2a32460 QL-ELE-00-001 195 bp View
DQ231581.1 nt Gateway vector pFGCGW, complete seq... 14831 bp Gateway vector pFGCGW QL-ELE-00-001 195 bp View
LT725132.1 nt Gateway expression vector pAGRIKOLA... 9735 bp Gateway expression vector pAGRIKOLA-CATMA2a33060 QL-ELE-00-001 195 bp View
LT724955.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a00990 QL-ELE-00-001 195 bp View
LT725133.1 nt Gateway expression vector pAGRIKOLA... 9561 bp Gateway expression vector pAGRIKOLA-CATMA2a33640 QL-ELE-00-001 195 bp View
LT725400.1 nt Gateway expression vector pAGRIKOLA... 9557 bp Gateway expression vector pAGRIKOLA-CATMA4a18910 QL-ELE-00-001 195 bp View
LT725134.1 nt Gateway expression vector pAGRIKOLA... 9559 bp Gateway expression vector pAGRIKOLA-CATMA2a33820 QL-ELE-00-001 195 bp View
LT724956.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a01000 QL-ELE-00-001 195 bp View
LT725135.1 nt Gateway expression vector pAGRIKOLA... 9785 bp Gateway expression vector pAGRIKOLA-CATMA2a33845 QL-ELE-00-001 195 bp View
LT724763.1 nt Gateway expression vector pAGRIKOLA... 9551 bp Gateway expression vector pAGRIKOLA-CATMA1a21320 QL-ELE-00-001 195 bp View
LT725561.1 nt Gateway expression vector pAGRIKOLA... 9735 bp Gateway expression vector pAGRIKOLA-CATMA5a33150 QL-ELE-00-001 195 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.