Amplicon details

Amplicon:

195 bp
1     gctcctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51    ctctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgacatctc cactgacgta agggatgacg cacaatccca ctatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725645.1 nt Gateway expression vector pAGRIKOLA... 9721 bp Gateway expression vector pAGRIKOLA-CATMA5a62640 QL-ELE-00-001 195 bp View
HF948885.1 nt Boechera divaricarpa GSS, clone B25... 1135 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
MH450170.1 nt Plant Stable Overexpression Vector ... 9143 bp Plant Stable Overexpression Vector pRGVcGFP QL-ELE-00-001 195 bp View
HF948958.1 nt Boechera divaricarpa GSS, clone B25... 1169 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT725654.1 nt Gateway expression vector pAGRIKOLA... 9587 bp Gateway expression vector pAGRIKOLA-CATMA5c64572 QL-ELE-00-001 195 bp View
HF949195.1 nt Boechera divaricarpa GSS, clone B25... 1202 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT724727.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA1a07540 QL-ELE-00-001 195 bp View
HF949215.1 nt Boechera divaricarpa GSS, clone B25... 1170 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT725337.1 nt Gateway expression vector pAGRIKOLA... 9729 bp Gateway expression vector pAGRIKOLA-CATMA3c57822 QL-ELE-00-001 195 bp View
LT725086.1 nt Gateway expression vector pAGRIKOLA... 10135 bp Gateway expression vector pAGRIKOLA-CATMA2a18070 QL-ELE-00-001 195 bp View
HF949425.1 nt Boechera divaricarpa GSS, clone B59... 1186 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
MH450171.1 nt Plant Stable Overexpression Vector ... 9119 bp Plant Stable Overexpression Vector pRGVcRFP QL-ELE-00-001 195 bp View
HF949531.1 nt Boechera divaricarpa GSS, clone B59... 1144 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT725346.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA4a02325 QL-ELE-00-001 195 bp View
HF949561.1 nt Boechera divaricarpa GSS, clone B59... 1195 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT724736.1 nt Gateway expression vector pAGRIKOLA... 9547 bp Gateway expression vector pAGRIKOLA-CATMA1a11870 QL-ELE-00-001 195 bp View
HF949886.1 nt Boechera divaricarpa GSS, clone B59... 1131 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT725355.1 nt Gateway expression vector pAGRIKOLA... 9553 bp Gateway expression vector pAGRIKOLA-CATMA4a09150 QL-ELE-00-001 195 bp View
HF949907.1 nt Boechera divaricarpa GSS, clone B59... 1153 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT725107.1 nt Gateway expression vector pAGRIKOLA... 9461 bp Gateway expression vector pAGRIKOLA-CATMA2a24530 QL-ELE-00-001 195 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.