Amplicon details

Amplicon:

195 bp
1     gctcctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51    ctctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgacatctc cactgacgta agggatgacg cacaatccca ctatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725003.1 nt Gateway expression vector pAGRIKOLA... 9713 bp Gateway expression vector pAGRIKOLA-CATMA2a12660 QL-ELE-00-001 195 bp View
LT724845.1 nt Gateway expression vector pAGRIKOLA... 9653 bp Gateway expression vector pAGRIKOLA-CATMA1a55750 QL-ELE-00-001 195 bp View
MK863362.1 nt Plant binary expression vector pNC-... 14245 bp Plant binary expression vector pNC-BiFC-VD4 QL-ELE-00-001 195 bp View
MH427726.1 nt Plant Stable Overexpression Vector ... 8415 bp Plant Stable Overexpression Vector pRGV QL-ELE-00-001 195 bp View
LT725012.1 nt Gateway expression vector pAGRIKOLA... 9599 bp Gateway expression vector pAGRIKOLA-CATMA2a12770 QL-ELE-00-001 195 bp View
LT725050.1 nt Gateway expression vector pAGRIKOLA... 9569 bp Gateway expression vector pAGRIKOLA-CATMA2a13680 QL-ELE-00-001 195 bp View
LT724954.1 nt Gateway expression vector pAGRIKOLA... 9449 bp Gateway expression vector pAGRIKOLA-CATMA2a00980 QL-ELE-00-001 195 bp View
MK863363.1 nt Plant binary expression vector pNC-... 11178 bp Plant binary expression vector pNC-BiFC-Vnc pNC-BiFC-Vnc QL-ELE-00-001 195 bp View
LT725021.1 nt Gateway expression vector pAGRIKOLA... 9451 bp Gateway expression vector pAGRIKOLA-CATMA2a13210 QL-ELE-00-001 195 bp View
LT725054.1 nt Gateway expression vector pAGRIKOLA... 9687 bp Gateway expression vector pAGRIKOLA-CATMA2a13760 QL-ELE-00-001 195 bp View
LT724709.1 nt Gateway expression vector pAGRIKOLA... 9923 bp Gateway expression vector pAGRIKOLA-CATMA1a01330 QL-ELE-00-001 195 bp View
NRN_GM963745 nrnl1 Sequence 77 from Patent WO2008142411. 1343 bp unidentified QL-ELE-00-001 195 bp View
LT725030.1 nt Gateway expression vector pAGRIKOLA... 9465 bp Gateway expression vector pAGRIKOLA-CATMA2a13400 QL-ELE-00-001 195 bp View
LT725059.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a13930 QL-ELE-00-001 195 bp View
MH450168.1 nt Plant Stable Overexpression Vector ... 8540 bp Plant Stable Overexpression Vector pRGVcHA QL-ELE-00-001 195 bp View
LT725062.1 nt Gateway expression vector pAGRIKOLA... 9853 bp Gateway expression vector pAGRIKOLA-CATMA2a13960 QL-ELE-00-001 195 bp View
LT725039.1 nt Gateway expression vector pAGRIKOLA... 9807 bp Gateway expression vector pAGRIKOLA-CATMA2a13550 QL-ELE-00-001 195 bp View
HF948574.1 nt Boechera divaricarpa GSS, clone B25... 1159 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT724718.1 nt Gateway expression vector pAGRIKOLA... 9499 bp Gateway expression vector pAGRIKOLA-CATMA1a03640 QL-ELE-00-001 195 bp View
LT725087.1 nt Gateway expression vector pAGRIKOLA... 9659 bp Gateway expression vector pAGRIKOLA-CATMA2a18900 QL-ELE-00-001 195 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.