Amplicon details

Amplicon:

195 bp
1     gctcctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51    ctctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgacatctc cactgacgta agggatgacg cacaatccca ctatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT724921.1 nt Gateway expression vector pAGRIKOLA... 10133 bp Gateway expression vector pAGRIKOLA-CATMA2a00540 QL-ELE-00-001 195 bp View
KM507057.1 nt Binary vector pDOE-16, complete seq... 13286 bp Binary vector pDOE-16 QL-ELE-00-001 195 bp View
KM507057.1 nt Binary vector pDOE-16, complete seq... 13286 bp Binary vector pDOE-16 QL-ELE-00-001 195 bp View
HF950140.1 nt Boechera divaricarpa GSS, clone B53... 1199 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT724922.1 nt Gateway expression vector pAGRIKOLA... 9691 bp Gateway expression vector pAGRIKOLA-CATMA2a00550 QL-ELE-00-001 195 bp View
LT724942.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a00810 QL-ELE-00-001 195 bp View
HF950541.1 nt Boechera divaricarpa GSS, clone B53... 1175 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT724798.1 nt Gateway expression vector pAGRIKOLA... 9521 bp Gateway expression vector pAGRIKOLA-CATMA1a31520 QL-ELE-00-001 195 bp View
JA774358.1 emblrelpat Sequence 7 from Patent WO2012019660. 6687 bp synthetic construct QL-ELE-00-001 195 bp View
JA774359.1 emblrelpat Sequence 8 from Patent WO2012019660. 6694 bp synthetic construct QL-ELE-00-001 195 bp View
LT724943.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a00820 QL-ELE-00-001 195 bp View
HF951363.1 nt Boechera divaricarpa GSS, clone B62... 1145 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT724944.1 nt Gateway expression vector pAGRIKOLA... 9725 bp Gateway expression vector pAGRIKOLA-CATMA2a00830 QL-ELE-00-001 195 bp View
LT724924.1 nt Gateway expression vector pAGRIKOLA... 9603 bp Gateway expression vector pAGRIKOLA-CATMA2a00590 QL-ELE-00-001 195 bp View
LT724945.1 nt Gateway expression vector pAGRIKOLA... 9437 bp Gateway expression vector pAGRIKOLA-CATMA2a00840 QL-ELE-00-001 195 bp View
JF909478.1 nt Cloning vector pPLV25, complete seq... 6042 bp Cloning vector pPLV25 QL-ELE-00-001 195 bp View
LT724946.1 nt Gateway expression vector pAGRIKOLA... 10135 bp Gateway expression vector pAGRIKOLA-CATMA2a00850 QL-ELE-00-001 195 bp View
LT724925.1 nt Gateway expression vector pAGRIKOLA... 9527 bp Gateway expression vector pAGRIKOLA-CATMA2a00610 QL-ELE-00-001 195 bp View
LT724947.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a00860 QL-ELE-00-001 195 bp View
LT725047.1 nt Gateway expression vector pAGRIKOLA... 9471 bp Gateway expression vector pAGRIKOLA-CATMA2a13650 QL-ELE-00-001 195 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.