Amplicon details

Amplicon:

195 bp
1     gctcctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51    ctctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgacatctc cactgacgta agggatgacg cacaatccca ctatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT724912.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a00410 QL-ELE-00-001 195 bp View
KP171166.1 nt Binary vector pYBA-1336, complete s... 6314 bp Binary vector pYBA-1336 QL-ELE-00-001 195 bp View
LT724917.1 nt Gateway expression vector pAGRIKOLA... 9667 bp Gateway expression vector pAGRIKOLA-CATMA2a00475 QL-ELE-00-001 195 bp View
KP171167.1 nt Binary vector pYBA-1337, complete s... 6299 bp Binary vector pYBA-1337 QL-ELE-00-001 195 bp View
LT724918.1 nt Gateway expression vector pAGRIKOLA... 9571 bp Gateway expression vector pAGRIKOLA-CATMA2a00490 QL-ELE-00-001 195 bp View
LT724919.1 nt Gateway expression vector pAGRIKOLA... 9447 bp Gateway expression vector pAGRIKOLA-CATMA2a00515 QL-ELE-00-001 195 bp View
KP171169.1 nt Binary vector pYBA-1339, complete s... 7256 bp Binary vector pYBA-1339 QL-ELE-00-001 195 bp View
LT724920.1 nt Gateway expression vector pAGRIKOLA... 9467 bp Gateway expression vector pAGRIKOLA-CATMA2a00520 QL-ELE-00-001 195 bp View
HF949362.1 nt Boechera divaricarpa GSS, clone B59... 1153 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT724921.1 nt Gateway expression vector pAGRIKOLA... 10133 bp Gateway expression vector pAGRIKOLA-CATMA2a00540 QL-ELE-00-001 195 bp View
HF950140.1 nt Boechera divaricarpa GSS, clone B53... 1199 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT724922.1 nt Gateway expression vector pAGRIKOLA... 9691 bp Gateway expression vector pAGRIKOLA-CATMA2a00550 QL-ELE-00-001 195 bp View
HF950541.1 nt Boechera divaricarpa GSS, clone B53... 1175 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT724923.1 nt Gateway expression vector pAGRIKOLA... 9683 bp Gateway expression vector pAGRIKOLA-CATMA2a00560 QL-ELE-00-001 195 bp View
HF951363.1 nt Boechera divaricarpa GSS, clone B62... 1145 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
LT724924.1 nt Gateway expression vector pAGRIKOLA... 9603 bp Gateway expression vector pAGRIKOLA-CATMA2a00590 QL-ELE-00-001 195 bp View
JF909478.1 nt Cloning vector pPLV25, complete seq... 6042 bp Cloning vector pPLV25 QL-ELE-00-001 195 bp View
LT724925.1 nt Gateway expression vector pAGRIKOLA... 9527 bp Gateway expression vector pAGRIKOLA-CATMA2a00610 QL-ELE-00-001 195 bp View
MH397716.1 nt Plant Stable Overexpression Vector ... 9359 bp Plant Stable Overexpression Vector pRHVnGFP QL-ELE-00-001 195 bp View
KM507048.1 nt Binary vector pDOE-07, complete seq... 12956 bp Binary vector pDOE-07 QL-ELE-00-001 195 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.