Amplicon details |
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Amplicon: |
552 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcctgtttt ccgaaaccaa aggttcagaa 151 agtgaaaaag ggataggtgc agagactcaa tggaagctgt tctaacaaat 201 ggagttggct gcgttagtag agaaatcttt ccatcgaaaa ttccgaaagg 251 ataaaacgta tacgtattga atactatatc aaatgattaa tgacgactcg 301 actgaatctg tattttttat atgaaaatgg aagaattggt gtgaatagat 351 tccacattga agaaagaatc gaacattcat tgattaaatg attcactcca 401 tagtctgata gatcttttca agaattgatt aatcggacga gaataaagat 451 agagtcccgt tctacatgtc aatgtcggca acaatgaaat ttatagtaag 501 aggaaaatcc gtcgacttta aaaatcgtga gggttcaagt ccctctatcc 551 cc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| AJ620158.1 | nt | Psydrax livida chloroplast trnT-trn... | 1680 bp | Psydrax livida | QL-PLN-00-007 | 552 bp | View |
| AJ620163.1 | nt | Psydrax schimperiana chloroplast tr... | 1677 bp | Psydrax schimperiana | QL-PLN-00-007 | 552 bp | View |
| FN386340.1 | nt | Psydrax faulknerae trnT-trnL IGS(pa... | 1694 bp | Psydrax faulknerae | QL-PLN-00-007 | 552 bp | View |
| KF488295.1 | nt | Psydrax faulknerae voucher Verstrae... | 1635 bp | Psydrax faulknerae | QL-PLN-00-007 | 552 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.