Amplicon details

Amplicon:

552 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcctgtttt ccgaaaccaa aggttcagaa
151   aatgaaaaag ggataggtgc agagactcga tggaagttgt tctaacaaat
201   ggagttggct gcgttagtaa agaaatcttt ccatcgaaaa ttccgaaagg
251   ataaaacgta tacgtattga atactatatc aaatgattaa tgacgactcg
301   actgaatccg tattttttat atgaaaacgg aagagttggt gtgaatagat
351   tccacattga agaaagaatc gaatattcat tgattaaatg attcactcca
401   tagtctgata gatcttttca agaattgatt aatcggacga gaataaagat
451   agagtcccgt tctacatgtc aatgtcggca acaatgaaat ttatagtaag
501   aggaaaatcc gtcgacttta aaaatcgtga gggttcaagt ccctctatcc
551   cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AJ620151.1 nt Multidentia fanshawei chloroplast t... 1731 bp Multidentia fanshawei QL-PLN-00-007 552 bp View
KF488292.1 nt Multidentia exserta voucher Verstra... 1692 bp Multidentia exserta QL-PLN-00-007 552 bp View
KF488294.1 nt Multidentia fanshawei voucher Verst... 1692 bp Multidentia fanshawei QL-PLN-00-007 552 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.