Amplicon details |
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Amplicon: |
552 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaac cctgagccaa atcctgtttt ccgaaaccaa aggttcagaa 151 agtgaaaaag ggataggtgc agagactcaa tggaagttgt tctaacaaat 201 ggagttggct gcgttagtaa agaaatcttt ccatcgaaaa ttccgaaagg 251 ataaaacgta tacgtattga atactatatc aaatgattaa tgacgcctcg 301 actgaatccg tattttttat atgaaaacgg aagagttggt gtgaatagat 351 tccacattga agaaagaatc gaatattcat tgattaaatg attcactcca 401 tagtctgata gatcttttca agaattgatt aatcggacga gaataaagat 451 agagtcccgt tctacatgtc aatgtcggca acaatgaaat ttatagtaag 501 aggaaaatcc gtcgacttta aaaatcgtga gggttcaagt ccctctatcc 551 cc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| AJ620136.1 | nt | Fadogia ancylantha chloroplast trnT... | 1723 bp | Fadogia ancylantha | QL-PLN-00-007 | 552 bp | View |
| AJ620140.1 | nt | Fadogia verdcourtii chloroplast trn... | 1707 bp | Fadogia verdcourtii | QL-PLN-00-007 | 552 bp | View |
| JQ958236.1 | nt | Fadogia ancylantha voucher Dessein ... | 1694 bp | Fadogia ancylantha | QL-PLN-00-007 | 552 bp | View |
| JQ958238.1 | nt | Fadogia salictaria voucher Malaisse... | 1694 bp | Fadogia salictaria | QL-PLN-00-007 | 552 bp | View |
| JQ958239.1 | nt | Fadogia fuchsioides voucher Dessein... | 1694 bp | Fadogia fuchsioides | QL-PLN-00-007 | 552 bp | View |
| KF488265.1 | nt | Fadogia ancylantha voucher Verstrae... | 1698 bp | Fadogia ancylantha | QL-PLN-00-007 | 552 bp | View |
| KF488271.1 | nt | Fadogia triphylla voucher Verstraet... | 1666 bp | Fadogia triphylla | QL-PLN-00-007 | 552 bp | View |
| KF488273.1 | nt | Fadogia triphylla var. triphylla vo... | 1682 bp | Fadogia triphylla var. triphylla | QL-PLN-00-007 | 552 bp | View |
| KF488277.1 | nt | Fadogia triphylla var. giorgii vouc... | 1666 bp | Fadogia triphylla var. giorgii | QL-PLN-00-007 | 552 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.