Amplicon details |
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Amplicon: |
552 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcctgtttt ccgaaaccaa aggttcagaa 151 agtgaaaaag ggataggtgc agagactcaa tggaagctgt tctaacaaat 201 ggagttggct gcgttagtag agaaatcttt ccatcgaaaa ttccgaaagg 251 ataaaacgta tacgtattga atactatatc aaatgattaa tgacgactcg 301 actgaatctg tattttttat atgaaaatgg aagaattggt gtgaatagat 351 tccacattga agaaagaatc gaatattcat tgattaaatg attcactcca 401 tagtctgata gatcttttca agaattgatt aatcggacga gaataaagat 451 agagtcccgt tctacatgtc aatgtcggca acaatgaaat ttatagtaat 501 aggaaaatcc gtcgacttta aaaatcgtga gggttcaagt ccctctatcc 551 cc |
Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
---|---|---|---|---|---|---|---|
AJ620131.1 | nt | Canthium pseudosetiflorum chloropla... | 1735 bp | Bullockia pseudosetiflora | QL-PLN-00-007 | 552 bp | View |
AJ620169.1 | nt | Pyrostria phyllantoidea chloroplast... | 1733 bp | Pyrostria phyllanthoidea | QL-PLN-00-007 | 552 bp | View |
AJ620176.1 | nt | Scyphochlamys revoluta chloroplast ... | 1735 bp | Pyrostria revoluta | QL-PLN-00-007 | 552 bp | View |
EF205635.1 | nt | Pyrostria anjouanensis trnT-trnL in... | 1679 bp | Pyrostria anjouanensis | QL-PLN-00-007 | 552 bp | View |
FN386321.1 | nt | Canthium carinatum trnT-trnL IGS(pa... | 1377 bp | Peponidium carinatum | QL-PLN-00-007 | 552 bp | View |
FN386322.1 | nt | Peponidium cystiporon trnT-trnL IGS... | 1673 bp | Peponidium cystiporon | QL-PLN-00-007 | 552 bp | View |
FN386331.1 | nt | Peponidium sp. Karehed et al. 204 t... | 1654 bp | Peponidium sp. Karehed et al. 204 | QL-PLN-00-007 | 552 bp | View |
FN386332.1 | nt | Peponidium sp. Karehed et al. 304 t... | 1673 bp | Peponidium sp. Karehed et al. 304 | QL-PLN-00-007 | 552 bp | View |
FN386342.1 | nt | Pyrostria anjouanensis trnT-trnL IG... | 1676 bp | Pyrostria anjouanensis | QL-PLN-00-007 | 552 bp | View |
FN386343.1 | nt | Pyrostria ixorifolia trnT-trnL IGS(... | 1562 bp | Pyrostria ixorifolia | QL-PLN-00-007 | 552 bp | View |
FN386344.1 | nt | Pyrostria major trnT-trnL IGS(parti... | 1671 bp | Pyrostria major | QL-PLN-00-007 | 552 bp | View |
FN386345.1 | nt | Pyrostria media trnT-trnL IGS(parti... | 1666 bp | Pyrostria media | QL-PLN-00-007 | 552 bp | View |
FN386347.1 | nt | Pyrostria orbicularis trnT-trnL IGS... | 1568 bp | Pyrostria orbicularis | QL-PLN-00-007 | 552 bp | View |
FN386349.1 | nt | Pyrostria richardiae trnT-trnL IGS(... | 1669 bp | Pyrostria richardiae | QL-PLN-00-007 | 552 bp | View |
FN386351.1 | nt | Pyrostria sp Rabenantoandro et al. ... | 1666 bp | Pyrostria sp. 1 Rabenantoandro et al. 770 | QL-PLN-00-007 | 552 bp | View |
FN386352.1 | nt | Pyrostria sp Eriksson et al. 947 tr... | 1655 bp | Pyrostria sp. 3 Eriksson et al. 947 | QL-PLN-00-007 | 552 bp | View |
FN386353.1 | nt | Pyrostria sp Mouly 600 trnT-trnL IG... | 1665 bp | Pyrostria sp. Mouly 600 | QL-PLN-00-007 | 552 bp | View |
FN386355.1 | nt | Pyrostria viburnoides trnT-trnL IGS... | 1651 bp | Pyrostria viburnoides | QL-PLN-00-007 | 552 bp | View |
JQ958222.1 | nt | Bullockia pseudosetiflora voucher B... | 1699 bp | Bullockia pseudosetiflora | QL-PLN-00-007 | 552 bp | View |
JQ958223.1 | nt | Bullockia setiflora voucher Lemaire... | 1708 bp | Bullockia setiflora | QL-PLN-00-007 | 552 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.