Amplicon details |
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Amplicon: |
552 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcctgtttt acgaaaccaa aggttcagaa 151 agtgaaaaag ggataggtgc agagactcaa tggaagttgt tctaacaaat 201 ggagttggct gcgttagtag agaaatcttt ccatcgaaaa ttccgaaagg 251 ataaaacgta tacgtattga atactatatc aaatgattaa tgacgactcg 301 actgaatctg tattttttat atgaaaacgg aagaattggt gtgaatagat 351 tccacattga agaaagaatc gaatattcat tgattaaatg attcactcca 401 tagtctgata gatcttttca agaattgatt aatcggacga gaataaagat 451 agagtcccgt tctacatgtc aatgtcggca acaatgaaat ttatagtaag 501 aggaaaatcc gtcgacttta aaaatcgtga gggttcaagt ccctctatcc 551 cc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| AJ620125.1 | nt | Canthium inerme chloroplast trnT-tr... | 1728 bp | Canthium inerme | QL-PLN-00-007 | 552 bp | View |
| JQ958232.1 | nt | Canthium inerme voucher Lemaire & V... | 1708 bp | Canthium inerme | QL-PLN-00-007 | 552 bp | View |
| JQ958234.1 | nt | Canthium suberosum voucher Burrows ... | 1687 bp | Canthium suberosum | QL-PLN-00-007 | 552 bp | View |
| JQ958233.1 | nt | Canthium kuntzeanum voucher Lemaire... | 1694 bp | Canthium kuntzeanum | QL-PLN-00-007 | 552 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.