Amplicon details

Amplicon:

559 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcctgtttt ccgaaaccaa aggttcagaa
151   attgaaaaat gaaaaaggga taggtgcaga gactcaatgg aagctgttct
201   aacaaatgga gttggcttcg ttagtagaga aatctttcta tcgaaaattc
251   cgaaaggata aaacgtatac gtattgaata ctatatcaaa tgattaatga
301   cgactcgact gaatctgtat tttttatatg aaaatggaag aattggtgtg
351   aatagattcc acattgaaga aagaatcgaa tattcattga ttaaatgatt
401   cactccatag tctgatagat attttcaaga attgattaat cggacgagaa
451   taaagataga gtcccgttct acatgtcaat gtcggcaaca atgaaaatta
501   tagtaagagg aaaatccgtc gactttaaaa atcgtgaggg ttcaagtccc
551   tctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AJ620123.1 nt Afrocanthium gilfillanii chloroplas... 1785 bp Afrocanthium gilfillanii QL-PLN-00-007 559 bp View
JQ958219.1 nt Afrocanthium gilfillanii voucher Le... 1757 bp Afrocanthium gilfillanii QL-PLN-00-007 559 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.