Amplicon details

Amplicon:

195 bp
1     gctcctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51    gcctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgacatctc cactgacgta agggatgacg cacaatccca ctatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
A24782.1 emblrelpat plasmid pJD884 replicable en E.coli 7639 bp Escherichia coli QL-ELE-00-001 195 bp View
CS632975.1 emblrelpat Sequence 10 from Patent WO2007056347. 8724 bp synthetic construct QL-ELE-00-001 195 bp View
CS646709.1 emblrelpat Sequence 51 from Patent WO2007059077. 11934 bp synthetic construct QL-ELE-00-001 195 bp View
HH833972.1 emblrelpat Sequence 4 from Patent WO2010104848. 16843 bp synthetic construct QL-ELE-00-001 195 bp View
CS646782.1 emblrelpat Sequence 37 from Patent WO2007061845. 7873 bp synthetic construct QL-ELE-00-001 195 bp View
AX093051.1 emblrelpat Sequence 56 from Patent WO0118192. 14108 bp synthetic construct QL-ELE-00-001 195 bp View
HJ965880.1 emblrelpat Sequence 49 from patent US 8716559. 8312 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470521 nrnl1 Sequence 64 from Patent WO2011079005. 14835 bp unidentified QL-ELE-00-001 195 bp View
HI578387.1 emblrelpat Sequence 3 from Patent WO2010114989. 10058 bp synthetic construct QL-ELE-00-001 195 bp View
CS646798.1 emblrelpat Sequence 53 from Patent WO2007061845. 12456 bp synthetic construct QL-ELE-00-001 195 bp View
HI578390.1 emblrelpat Sequence 6 from Patent WO2010114989. 11251 bp synthetic construct QL-ELE-00-001 195 bp View
CS646799.1 emblrelpat Sequence 54 from Patent WO2007061845. 9088 bp synthetic construct QL-ELE-00-001 195 bp View
CS646840.1 emblrelpat Sequence 95 from Patent WO2007061845. 8138 bp synthetic construct QL-ELE-00-001 195 bp View
HK353188.1 emblrelpat Sequence 99 from patent US 8927809. 8641 bp unidentified QL-ELE-00-001 195 bp View
HI578404.1 emblrelpat Sequence 20 from Patent WO2010114989. 8314 bp synthetic construct QL-ELE-00-001 195 bp View
CS671160.1 emblrelpat Sequence 55 from Patent WO2007061742. 7085 bp synthetic construct QL-ELE-00-001 195 bp View
HI578409.1 emblrelpat Sequence 25 from Patent WO2010114989. 11736 bp synthetic construct QL-ELE-00-001 195 bp View
HI578410.1 emblrelpat Sequence 26 from Patent WO2010114989. 12929 bp synthetic construct QL-ELE-00-001 195 bp View
NRN_A75888 nrnl1 Sequence 3 from Patent WO9321335. 5636 bp unidentified QL-ELE-00-001 195 bp View
JC529613.1 emblrelpat Sequence 59 from Patent EP2730656. 9223 bp synthetic construct QL-ELE-00-001 195 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.