Amplicon details

Amplicon:

123 bp
1     ccacgtcttc aaagcaagtg gattgatgtg acatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HF950136.1 nt Boechera divaricarpa GSS, clone B53... 1140 bp Boechera divaricarpa QL-ELE-00-004 123 bp View
HF950138.1 nt Boechera divaricarpa GSS, clone B53... 1176 bp Boechera divaricarpa QL-ELE-00-004 123 bp View
HF950140.1 nt Boechera divaricarpa GSS, clone B53... 1199 bp Boechera divaricarpa QL-ELE-00-004 123 bp View
HF950532.1 nt Boechera divaricarpa GSS, clone B53... 1208 bp Boechera divaricarpa QL-ELE-00-004 123 bp View
HF950541.1 nt Boechera divaricarpa GSS, clone B53... 1175 bp Boechera divaricarpa QL-ELE-00-004 123 bp View
HF951213.1 nt Boechera divaricarpa GSS, clone B62... 1125 bp Boechera divaricarpa QL-ELE-00-004 123 bp View
HF951329.1 nt Boechera divaricarpa GSS, clone B62... 1140 bp Boechera divaricarpa QL-ELE-00-004 123 bp View
HF951363.1 nt Boechera divaricarpa GSS, clone B62... 1145 bp Boechera divaricarpa QL-ELE-00-004 123 bp View
HF951365.1 nt Boechera divaricarpa GSS, clone B62... 1162 bp Boechera divaricarpa QL-ELE-00-004 123 bp View
HF951397.1 nt Boechera divaricarpa GSS, clone B62... 1153 bp Boechera divaricarpa QL-ELE-00-004 123 bp View
LT724955.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a00990 QL-ELE-00-004 123 bp View
LT724956.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a01000 QL-ELE-00-004 123 bp View
OP947586.1 nt Cauliflower mosaic virus isolate DS... 8028 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View
ON092626.1 nt Moss mCitrine knock-in vector, comp... 6023 bp Moss mCitrine knock-in vector QL-ELE-00-004 123 bp View
ON092627.1 nt Moss mClover3 knock-in vector, comp... 6023 bp Moss mClover3 knock-in vector QL-ELE-00-004 123 bp View
LT724957.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a01010 QL-ELE-00-004 123 bp View
KP244679.1 nt Binary vector pJZ253, complete sequ... 11951 bp Binary vector pJZ253 QL-ELE-00-004 123 bp View
KP244681.1 nt Binary vector pJZ202, complete sequ... 12438 bp Binary vector pJZ202 QL-ELE-00-004 123 bp View
JB318774.1 emblrelpat Sequence 117 from Patent EP2441843. 9190 bp synthetic construct QL-ELE-00-004 123 bp View
NRN_CS249133 nrnl1 Sequence 5 from Patent WO2005121347... 5303 bp unidentified QL-ELE-00-004 123 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.