Amplicon details

Amplicon:

123 bp
1     ccacgtcttc aaagcaagtg gattgatgtg acatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_JA470571 nrnl1 Sequence 114 from Patent WO2011079005. 14674 bp unidentified QL-ELE-00-004 123 bp View
NRN_JA279575 nrnl1 Sequence 110 from Patent WO2011008510. 8432 bp unidentified QL-ELE-00-004 123 bp View
EU048866.1 nt Cloning vector pGreenII 0179, T-DNA... 2649 bp Cloning vector pGreenII 0179 QL-ELE-00-004 123 bp View
JF909456.1 nt Cloning vector pPLV03, complete seq... 5424 bp Cloning vector pPLV03 QL-ELE-00-004 123 bp View
JF909474.1 nt Cloning vector pPLV21, complete seq... 6151 bp Cloning vector pPLV21 QL-ELE-00-004 123 bp View
JF909483.1 nt Cloning vector pPLV30, complete seq... 9152 bp Cloning vector pPLV30 QL-ELE-00-004 123 bp View
AB537481.1 nt Moss transformation vector pPGX6 DN... 12514 bp Moss transformation vector pPGX6 QL-ELE-00-004 123 bp View
KF876802.1 nt Binary vector pYBA-1138, complete s... 6557 bp Binary vector pYBA-1138 QL-ELE-00-004 123 bp View
KJ081791.1 nt Cloning vector pBullet-tg-n, comple... 8700 bp Cloning vector pBullet-tg-n QL-ELE-00-004 123 bp View
MG976844.1 nt Glycine max clone BAC B73P06 genomi... 134143 bp Glycine max QL-ELE-00-004 123 bp View
MK863361.1 nt Plant binary expression vector pNC-... 14252 bp Plant binary expression vector pNC-BiFC-VD3 QL-ELE-00-004 123 bp View
MK863360.1 nt Plant binary expression vector pNC-... 14255 bp Plant binary expression vector pNC-BiFC-VD2 QL-ELE-00-004 123 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.