Amplicon details

Amplicon:

123 bp
1     ccacgtcttc aaagcaagtg gattgatgtg acatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ211685.1 nt Cauliflower mosaic virus P6 transac... 1800 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View
DQ228130.1 nt Moss transformation vector pMBL5, c... 4296 bp Moss transformation vector pMBL5 QL-ELE-00-004 123 bp View
DQ228131.1 nt Moss transformation vector pMBL6, c... 4295 bp Moss transformation vector pMBL6 QL-ELE-00-004 123 bp View
DQ231581.1 nt Gateway vector pFGCGW, complete seq... 14831 bp Gateway vector pFGCGW QL-ELE-00-004 123 bp View
DQ462470.1 nt Cloning Vector pKANNIFAD401, comple... 6859 bp Cloning Vector pKANNIFAD401 QL-ELE-00-004 123 bp View
DQ462471.1 nt Cloning Vector pKANNIFAD200, comple... 6457 bp Cloning Vector pKANNIFAD200 QL-ELE-00-004 123 bp View
DQ645630.1 nt Activation-tagging vector pEnLox, c... 4648 bp Activation-tagging vector pEnLox QL-ELE-00-004 123 bp View
EF010978.1 nt Silencing vector pFE12860S, complet... 6158 bp Silencing vector pFE12860S QL-ELE-00-004 123 bp View
EF010979.1 nt Silencing vector pSE12860S, complet... 6268 bp Silencing vector pSE12860S QL-ELE-00-004 123 bp View
DQ995484.1 nt Overexpression vector pFE12860OE, c... 7022 bp Overexpression vector pFE12860OE QL-ELE-00-004 123 bp View
DQ995486.1 nt Overexpression vector pFC12850OE, c... 6925 bp Overexpression vector pFC12850OE QL-ELE-00-004 123 bp View
DQ995487.1 nt Overexpression vector pFC12860OE, c... 9217 bp Overexpression vector pFC12860OE QL-ELE-00-004 123 bp View
AB267705.1 nt Moss transformation vector pTN86 DN... 2383 bp Moss transformation vector pTN86 QL-ELE-00-004 123 bp View
AB267707.1 nt Moss transformation vector pTN85 DN... 4325 bp Moss transformation vector pTN85 QL-ELE-00-004 123 bp View
EU048863.1 nt Cloning vector pGreenII 0800, T-DNA... 3894 bp Cloning vector pGreenII 0800 QL-ELE-00-004 123 bp View
AB472844.1 nt Moss transformation vector pPIG1HG ... 9735 bp Moss transformation vector pPIG1HG QL-ELE-00-004 123 bp View
GQ497230.1 nt Binary vector pEAQexpress, complete... 6889 bp Binary vector pEAQexpress QL-ELE-00-004 123 bp View
GQ497232.1 nt Binary vector pEAQspecialK, complet... 8643 bp Binary vector pEAQspecialK QL-ELE-00-004 123 bp View
GQ497233.1 nt Binary vector pEAQspecialKm, comple... 8643 bp Binary vector pEAQspecialKm QL-ELE-00-004 123 bp View
NRN_CS249133 nrnl1 Sequence 5 from Patent WO2005121347... 5303 bp unidentified QL-ELE-00-004 123 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.