Match details
Record ID: |
LZ219019.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
JP 2017169563-A/29: AAD-1 Event DAS-40278-9, Related Transgenic Corn Lines, and Event-Specific Identification Thereof. |
Taxon: |
synthetic construct |
Original size: |
8557 bp |
Patents: |
JP2017169563 (lens, espacenet)
|
View other 18 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1820 |
1917 |
+ |
98 bp |
|
1 cacgaaccat tgagttacaa tcaacagcac cgtaccttga agcggaatac
51 aatgaaggtt agctacgatt tacagcaaag ccagaataca atgaacca
View other 18 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
22 bp |
0 |
0 |
1 |
22 |
4.29e-10 |
primerB |
100.0 |
23 bp |
0 |
0 |
98 |
76 |
1.26e-10 |
primerB |
100.0 |
12 bp |
0 |
0 |
56 |
45 |
1.64e-04 |
probe |
100.0 |
25 bp |
0 |
0 |
67 |
43 |
1.08e-11 |
probe |
100.0 |
12 bp |
0 |
0 |
95 |
84 |
1.83e-04 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.