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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1655 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MH818810.1 nt Cloning vector pAMEXlox-2, complete... 5481 bp Cloning vector pAMEXlox-2 QL-ELE-00-023 137 bp View
MI377315.1 emblrelpat Sequence 21 from patent US 9856489. 12295 bp unidentified QL-ELE-00-023 137 bp View
MI436601.1 emblrelpat Sequence 54 from patent US 9896696. 209 bp unidentified QL-ELE-00-023 137 bp View
MI436613.1 emblrelpat Sequence 75 from patent US 9896696. 5302 bp unidentified QL-ELE-00-023 137 bp View
MI436618.1 emblrelpat Sequence 81 from patent US 9896696. 7492 bp unidentified QL-ELE-00-023 137 bp View
MI436619.1 emblrelpat Sequence 82 from patent US 9896696. 7520 bp unidentified QL-ELE-00-023 137 bp View
MI436620.1 emblrelpat Sequence 83 from patent US 9896696. 7202 bp unidentified QL-ELE-00-023 137 bp View
MI436621.1 emblrelpat Sequence 84 from patent US 9896696. 7298 bp unidentified QL-ELE-00-023 137 bp View
MI436622.1 emblrelpat Sequence 85 from patent US 9896696. 7718 bp unidentified QL-ELE-00-023 137 bp View
MI436623.1 emblrelpat Sequence 86 from patent US 9896696. 7337 bp unidentified QL-ELE-00-023 137 bp View
MI436624.1 emblrelpat Sequence 87 from patent US 9896696. 7379 bp unidentified QL-ELE-00-023 137 bp View
MI436625.1 emblrelpat Sequence 88 from patent US 9896696. 7553 bp unidentified QL-ELE-00-023 137 bp View
MI436626.1 emblrelpat Sequence 89 from patent US 9896696. 5302 bp unidentified QL-ELE-00-023 137 bp View
MI436627.1 emblrelpat Sequence 90 from patent US 9896696. 5302 bp unidentified QL-ELE-00-023 137 bp View
MI436690.1 emblrelpat Sequence 221 from patent US 9896696. 7967 bp unidentified QL-ELE-00-023 137 bp View
MI436691.1 emblrelpat Sequence 222 from patent US 9896696. 7680 bp unidentified QL-ELE-00-023 137 bp View
MI436692.1 emblrelpat Sequence 223 from patent US 9896696. 7775 bp unidentified QL-ELE-00-023 137 bp View
MI436693.1 emblrelpat Sequence 224 from patent US 9896696. 7856 bp unidentified QL-ELE-00-023 137 bp View
MI436694.1 emblrelpat Sequence 225 from patent US 9896696. 7890 bp unidentified QL-ELE-00-023 137 bp View
MI436695.1 emblrelpat Sequence 226 from patent US 9896696. 7637 bp unidentified QL-ELE-00-023 137 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.