European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1655 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MA129327.1 emblrelpat JP 2018500885-A/300: MATERIALS AND ... 5600 bp synthetic construct QL-ELE-00-023 137 bp View
MA725702.1 emblrelpat JP 2017104132-A/3: Tailored Oils Pr... 2615 bp Saccharomyces cerevisiae QL-ELE-00-023 137 bp View
MA725816.1 emblrelpat JP 2017104132-A/117: Tailored Oils ... 2435 bp synthetic construct QL-ELE-00-023 137 bp View
MA816586.1 emblrelpat WO 2018220929-A/21: EXPRESSION SYST... 209 bp Cauliflower mosaic virus QL-ELE-00-023 137 bp View
MB124406.1 emblrelpat JP 2019110860-A/5: Production metho... 187 bp synthetic construct QL-ELE-00-023 137 bp View
MB438325.1 emblrelpat JP 2018075040-A/3: PRODUCTION OF TA... 2615 bp Saccharomyces cerevisiae QL-ELE-00-023 137 bp View
MB442411.1 emblrelpat JP 2018099138-A/3: Tailored Oils Pr... 2615 bp Saccharomyces cerevisiae QL-ELE-00-023 137 bp View
MB444122.1 emblrelpat JP 2018104722-A/3: MICROBIAL OILS W... 2615 bp Saccharomyces cerevisiae QL-ELE-00-023 137 bp View
MB446230.1 emblrelpat JP 2018148907-A/1: Method for produ... 12295 bp synthetic construct QL-ELE-00-023 137 bp View
MD390381.1 emblrelpat JP 2020519239-A/1: EXPRESSION VECTO... 15521 bp synthetic construct QL-ELE-00-023 137 bp View
MD731995.1 emblrelpat JP 2019062919-A/3: Tailored Oils Pr... 2615 bp Saccharomyces cerevisiae QL-ELE-00-023 137 bp View
MD732109.1 emblrelpat JP 2019062919-A/117: Tailored Oils ... 2435 bp synthetic construct QL-ELE-00-023 137 bp View
MF375491.1 nt Ti plasmid binary vector pGSh16.101... 17356 bp Ti plasmid binary vector pGSh16.1010 QL-ELE-00-023 137 bp View
MF479729.1 nt Ti plasmid binary vector pGSh16.101... 16639 bp Ti plasmid binary vector pGSh16.1012 QL-ELE-00-023 137 bp View
MF944257.1 nt Ti plasmid binary vector pGSh16.052... 10439 bp Ti plasmid binary vector pGSh16.0520 QL-ELE-00-023 137 bp View
MG014392.1 nt Multipurpose vector pCAHUMO, comple... 4311 bp Multipurpose vector pCAHUMO QL-ELE-00-023 137 bp View
MG561370.1 nt Binary vector pCAMBIA_ASX, complete... 9753 bp Binary vector pCAMBIA_ASX QL-ELE-00-023 137 bp View
MG687283.1 nt Cloning vector GAANTRY B donor tdTo... 8923 bp Cloning vector GAANTRY B donor tdTom QL-ELE-00-023 137 bp View
MG719235.1 nt Plant binary expression vector pCaB... 10647 bp Plant binary expression vector pCaBGi QL-ELE-00-023 137 bp View
MG719602.1 nt Vector pYLCRISPR/Cas9Pubi-N, comple... 16203 bp Vector pYLCRISPR/Cas9Pubi-N QL-ELE-00-023 137 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.