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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1655 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LY520366.1 emblrelpat KR 1020170099884-A/279: MATERIALS A... 60074 bp synthetic construct QL-ELE-00-023 137 bp View
LY520366.1 emblrelpat KR 1020170099884-A/279: MATERIALS A... 60074 bp synthetic construct QL-ELE-00-023 137 bp View
LY520367.1 emblrelpat KR 1020170099884-A/280: MATERIALS A... 44910 bp synthetic construct QL-ELE-00-023 137 bp View
LY520367.1 emblrelpat KR 1020170099884-A/280: MATERIALS A... 44910 bp synthetic construct QL-ELE-00-023 137 bp View
LY520368.1 emblrelpat KR 1020170099884-A/281: MATERIALS A... 43757 bp synthetic construct QL-ELE-00-023 137 bp View
LY520368.1 emblrelpat KR 1020170099884-A/281: MATERIALS A... 43757 bp synthetic construct QL-ELE-00-023 137 bp View
LY520376.1 emblrelpat KR 1020170099884-A/289: MATERIALS A... 47800 bp synthetic construct QL-ELE-00-023 137 bp View
LY520376.1 emblrelpat KR 1020170099884-A/289: MATERIALS A... 47800 bp synthetic construct QL-ELE-00-023 137 bp View
LY520377.1 emblrelpat KR 1020170099884-A/290: MATERIALS A... 43773 bp synthetic construct QL-ELE-00-023 137 bp View
LY520377.1 emblrelpat KR 1020170099884-A/290: MATERIALS A... 43773 bp synthetic construct QL-ELE-00-023 137 bp View
LY520385.1 emblrelpat KR 1020170099884-A/298: MATERIALS A... 45777 bp synthetic construct QL-ELE-00-023 137 bp View
LY520385.1 emblrelpat KR 1020170099884-A/298: MATERIALS A... 45777 bp synthetic construct QL-ELE-00-023 137 bp View
LY520386.1 emblrelpat KR 1020170099884-A/299: MATERIALS A... 43720 bp synthetic construct QL-ELE-00-023 137 bp View
LY520386.1 emblrelpat KR 1020170099884-A/299: MATERIALS A... 43720 bp synthetic construct QL-ELE-00-023 137 bp View
LY520394.1 emblrelpat KR 1020170099884-A/307: MATERIALS A... 39620 bp synthetic construct QL-ELE-00-023 137 bp View
LY520394.1 emblrelpat KR 1020170099884-A/307: MATERIALS A... 39620 bp synthetic construct QL-ELE-00-023 137 bp View
LY520395.1 emblrelpat KR 1020170099884-A/308: MATERIALS A... 37487 bp synthetic construct QL-ELE-00-023 137 bp View
LY520395.1 emblrelpat KR 1020170099884-A/308: MATERIALS A... 37487 bp synthetic construct QL-ELE-00-023 137 bp View
LY520398.1 emblrelpat KR 1020170099884-A/311: MATERIALS A... 5600 bp synthetic construct QL-ELE-00-023 137 bp View
LY529649.1 emblrelpat KR 1020170091170-A/8: Production of... 2615 bp Saccharomyces cerevisiae QL-ELE-00-023 137 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.