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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1655 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LQ954986.1 emblrelpat Sequence 9 from Patent WO2014194190. 15905 bp synthetic construct QL-ELE-00-023 137 bp View
LQ954988.1 emblrelpat Sequence 11 from Patent WO2014194190. 14951 bp synthetic construct QL-ELE-00-023 137 bp View
LV623159.1 emblrelpat JP 2016005484-A/3: Food Composition... 2615 bp Saccharomyces cerevisiae QL-ELE-00-023 137 bp View
LV623273.1 emblrelpat JP 2016005484-A/117: Food Compositi... 2435 bp synthetic construct QL-ELE-00-023 137 bp View
LV745935.1 emblrelpat JP 2015519071-A/1: Method for produ... 12295 bp synthetic construct QL-ELE-00-023 137 bp View
LX269975.1 emblrelpat JP 2016065258-A/3: MICROBIAL OILS W... 2615 bp Saccharomyces cerevisiae QL-ELE-00-023 137 bp View
LY520099.1 emblrelpat KR 1020170099884-A/1: MATERIALS AND... 60097 bp synthetic construct QL-ELE-00-023 137 bp View
LY520099.1 emblrelpat KR 1020170099884-A/1: MATERIALS AND... 60097 bp synthetic construct QL-ELE-00-023 137 bp View
LY520100.1 emblrelpat KR 1020170099884-A/2: MATERIALS AND... 61102 bp synthetic construct QL-ELE-00-023 137 bp View
LY520100.1 emblrelpat KR 1020170099884-A/2: MATERIALS AND... 61102 bp synthetic construct QL-ELE-00-023 137 bp View
LY520101.1 emblrelpat KR 1020170099884-A/3: MATERIALS AND... 60074 bp synthetic construct QL-ELE-00-023 137 bp View
LY520101.1 emblrelpat KR 1020170099884-A/3: MATERIALS AND... 60074 bp synthetic construct QL-ELE-00-023 137 bp View
LY520102.1 emblrelpat KR 1020170099884-A/4: MATERIALS AND... 61092 bp synthetic construct QL-ELE-00-023 137 bp View
LY520102.1 emblrelpat KR 1020170099884-A/4: MATERIALS AND... 61092 bp synthetic construct QL-ELE-00-023 137 bp View
LY520103.1 emblrelpat KR 1020170099884-A/5: MATERIALS AND... 26802 bp synthetic construct QL-ELE-00-023 137 bp View
LY520104.1 emblrelpat KR 1020170099884-A/6: MATERIALS AND... 30687 bp synthetic construct QL-ELE-00-023 137 bp View
LY520105.1 emblrelpat KR 1020170099884-A/7: MATERIALS AND... 24750 bp synthetic construct QL-ELE-00-023 137 bp View
LY520106.1 emblrelpat KR 1020170099884-A/8: MATERIALS AND... 21523 bp synthetic construct QL-ELE-00-023 137 bp View
LY520107.1 emblrelpat KR 1020170099884-A/9: MATERIALS AND... 21639 bp synthetic construct QL-ELE-00-023 137 bp View
LY520337.1 emblrelpat KR 1020170099884-A/239: MATERIALS A... 5600 bp synthetic construct QL-ELE-00-023 137 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.