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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1655 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LQ495614.1 emblrelpat Sequence 308 from Patent WO2016075313. 37487 bp synthetic construct QL-ELE-00-023 137 bp View
LQ495617.1 emblrelpat Sequence 311 from Patent WO2016075313. 5600 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498568.1 emblrelpat Sequence 1 from Patent WO2016075303. 60074 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498568.1 emblrelpat Sequence 1 from Patent WO2016075303. 60074 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498569.1 emblrelpat Sequence 2 from Patent WO2016075303. 44910 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498569.1 emblrelpat Sequence 2 from Patent WO2016075303. 44910 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498570.1 emblrelpat Sequence 3 from Patent WO2016075303. 43757 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498570.1 emblrelpat Sequence 3 from Patent WO2016075303. 43757 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498578.1 emblrelpat Sequence 11 from Patent WO2016075303. 47800 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498578.1 emblrelpat Sequence 11 from Patent WO2016075303. 47800 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498579.1 emblrelpat Sequence 12 from Patent WO2016075303. 43773 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498579.1 emblrelpat Sequence 12 from Patent WO2016075303. 43773 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498587.1 emblrelpat Sequence 20 from Patent WO2016075303. 45777 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498587.1 emblrelpat Sequence 20 from Patent WO2016075303. 45777 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498588.1 emblrelpat Sequence 21 from Patent WO2016075303. 43720 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498588.1 emblrelpat Sequence 21 from Patent WO2016075303. 43720 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498596.1 emblrelpat Sequence 29 from Patent WO2016075303. 39620 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498596.1 emblrelpat Sequence 29 from Patent WO2016075303. 39620 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498597.1 emblrelpat Sequence 30 from Patent WO2016075303. 37487 bp synthetic construct QL-ELE-00-023 137 bp View
LQ498597.1 emblrelpat Sequence 30 from Patent WO2016075303. 37487 bp synthetic construct QL-ELE-00-023 137 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.