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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 8017 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
AB294447.1 nt Gateway binary vector pGWB423 DNA, ... 12363 bp Gateway binary vector pGWB423 QL-ELE-00-001 195 bp View
AB294448.1 nt Gateway binary vector pGWB424 DNA, ... 12365 bp Gateway binary vector pGWB424 QL-ELE-00-001 195 bp View
AB294450.1 nt Gateway binary vector pGWB426 DNA, ... 11718 bp Gateway binary vector pGWB426 QL-ELE-00-001 195 bp View
AB294451.1 nt Gateway binary vector pGWB427 DNA, ... 11720 bp Gateway binary vector pGWB427 QL-ELE-00-001 195 bp View
AB294453.1 nt Gateway binary vector pGWB429 DNA, ... 12231 bp Gateway binary vector pGWB429 QL-ELE-00-001 195 bp View
AB294457.1 nt Gateway binary vector pGWB441 DNA, ... 12402 bp Gateway binary vector pGWB441 QL-ELE-00-001 195 bp View
AB294458.1 nt Gateway binary vector pGWB442 DNA, ... 12404 bp Gateway binary vector pGWB442 QL-ELE-00-001 195 bp View
AB294460.1 nt Gateway binary vector pGWB444 DNA, ... 12402 bp Gateway binary vector pGWB444 QL-ELE-00-001 195 bp View
AB294461.1 nt Gateway binary vector pGWB445 DNA, ... 12404 bp Gateway binary vector pGWB445 QL-ELE-00-001 195 bp View
AB294463.1 nt Gateway binary vector pGWB451 DNA, ... 12402 bp Gateway binary vector pGWB451 QL-ELE-00-001 195 bp View
AB294464.1 nt Gateway binary vector pGWB452 DNA, ... 12401 bp Gateway binary vector pGWB452 QL-ELE-00-001 195 bp View
AB294466.1 nt Gateway binary vector pGWB454 DNA, ... 12363 bp Gateway binary vector pGWB454 QL-ELE-00-001 195 bp View
AB294467.1 nt Gateway binary vector pGWB455 DNA, ... 12362 bp Gateway binary vector pGWB455 QL-ELE-00-001 195 bp View
AB294469.1 nt Gateway binary vector pGWB502 DNA, ... 12006 bp Gateway binary vector pGWB502 QL-ELE-00-001 195 bp View
AB294472.1 nt Gateway binary vector pGWB505 DNA, ... 12735 bp Gateway binary vector pGWB505 QL-ELE-00-001 195 bp View
AB294473.1 nt Gateway binary vector pGWB506 DNA, ... 12728 bp Gateway binary vector pGWB506 QL-ELE-00-001 195 bp View
AB294475.1 nt Gateway binary vector pGWB508 DNA, ... 12024 bp Gateway binary vector pGWB508 QL-ELE-00-001 195 bp View
AB294476.1 nt Gateway binary vector pGWB509 DNA, ... 12026 bp Gateway binary vector pGWB509 QL-ELE-00-001 195 bp View
AB294478.1 nt Gateway binary vector pGWB511 DNA, ... 12030 bp Gateway binary vector pGWB511 QL-ELE-00-001 195 bp View
AB294479.1 nt Gateway binary vector pGWB512 DNA, ... 12032 bp Gateway binary vector pGWB512 QL-ELE-00-001 195 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.