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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 8017 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_JA765424 nrnl1 Sequence 5 from Patent EP2418283. ... 7424 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA765425 nrnl1 Sequence 6 from Patent EP2418283. ... 6660 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA774358 nrnl1 Sequence 7 from Patent WO2012019660. 6687 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA774358 nrnl1 Sequence 7 from Patent WO2012019660. 6687 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA774359 nrnl1 Sequence 8 from Patent WO2012019660. 6694 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA774360 nrnl1 Sequence 9 from Patent WO2012019660. 7714 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA774361 nrnl1 Sequence 10 from Patent WO2012019660. 8294 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA780997 nrnl1 Sequence 1 from Patent WO2012048221. 16800 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA780998 nrnl1 Sequence 2 from Patent WO2012048221. 10933 bp unidentified QL-ELE-00-001 195 bp View
OF040676.1 emblrelpat KR 1020200083595-A/1: PRODUCTION OF... 21527 bp synthetic construct QL-ELE-00-001 195 bp View
OF040677.1 emblrelpat KR 1020200083595-A/2: PRODUCTION OF... 23512 bp synthetic construct QL-ELE-00-001 195 bp View
OF040678.1 emblrelpat KR 1020200083595-A/3: PRODUCTION OF... 25787 bp synthetic construct QL-ELE-00-001 195 bp View
OF040679.1 emblrelpat KR 1020200083595-A/4: PRODUCTION OF... 22824 bp synthetic construct QL-ELE-00-001 195 bp View
OF040680.1 emblrelpat KR 1020200083595-A/5: PRODUCTION OF... 24809 bp synthetic construct QL-ELE-00-001 195 bp View
OF040681.1 emblrelpat KR 1020200083595-A/6: PRODUCTION OF... 26543 bp synthetic construct QL-ELE-00-001 195 bp View
OF040682.1 emblrelpat KR 1020200083595-A/7: PRODUCTION OF... 23760 bp synthetic construct QL-ELE-00-001 195 bp View
OF043694.1 emblrelpat KR 1020200092363-A/162: MODIFIED NO... 4540 bp synthetic construct QL-ELE-00-001 195 bp View
OF043695.1 emblrelpat KR 1020200092363-A/163: MODIFIED NO... 2976 bp synthetic construct QL-ELE-00-001 195 bp View
OF043696.1 emblrelpat KR 1020200092363-A/164: MODIFIED NO... 5652 bp synthetic construct QL-ELE-00-001 195 bp View
OF043697.1 emblrelpat KR 1020200092363-A/165: MODIFIED NO... 2952 bp synthetic construct QL-ELE-00-001 195 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.