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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 8017 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_JA470601 nrnl1 Sequence 144 from Patent WO2011079005. 12599 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470602 nrnl1 Sequence 145 from Patent WO2011079005. 17155 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470603 nrnl1 Sequence 146 from Patent WO2011079005. 11836 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470604 nrnl1 Sequence 147 from Patent WO2011079005. 8488 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470605 nrnl1 Sequence 148 from Patent WO2011079005. 8488 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470606 nrnl1 Sequence 149 from Patent WO2011079005. 8485 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470607 nrnl1 Sequence 150 from Patent WO2011079005. 8494 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470611 nrnl1 Sequence 154 from Patent WO2011079005. 15084 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470612 nrnl1 Sequence 155 from Patent WO2011079005. 15084 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470613 nrnl1 Sequence 156 from Patent WO2011079005. 15081 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470614 nrnl1 Sequence 157 from Patent WO2011079005. 15090 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470615 nrnl1 Sequence 158 from Patent WO2011079005. 15097 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA613723 nrnl1 Sequence 4 from Patent WO2011120549. 7242 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA640276 nrnl1 Sequence 22 from Patent WO2011136651. 5201 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA640277 nrnl1 Sequence 23 from Patent WO2011136651. 13647 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA659783 nrnl1 Sequence 1 from Patent EP2385130. ... 13583 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA682416 nrnl1 Sequence 20 from Patent WO2011148331. 2063 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA761603 nrnl1 Sequence 5 from Patent WO2012013823. 2452 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA765420 nrnl1 Sequence 1 from Patent EP2418283. ... 3047 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA765421 nrnl1 Sequence 2 from Patent EP2418283. ... 4424 bp unidentified QL-ELE-00-001 195 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.