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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 8017 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_JA470521 nrnl1 Sequence 64 from Patent WO2011079005. 14835 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470522 nrnl1 Sequence 65 from Patent WO2011079005. 10634 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470524 nrnl1 Sequence 67 from Patent WO2011079005. 14554 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470526 nrnl1 Sequence 69 from Patent WO2011079005. 14545 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470527 nrnl1 Sequence 70 from Patent WO2011079005. 18903 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470528 nrnl1 Sequence 71 from Patent WO2011079005. 22872 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470529 nrnl1 Sequence 72 from Patent WO2011079005. 22863 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470530 nrnl1 Sequence 73 from Patent WO2011079005. 18662 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470531 nrnl1 Sequence 74 from Patent WO2011079005. 22582 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470532 nrnl1 Sequence 75 from Patent WO2011079005. 22573 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470568 nrnl1 Sequence 111 from Patent WO20110790... 8260 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470570 nrnl1 Sequence 113 from Patent WO2011079005. 10763 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470571 nrnl1 Sequence 114 from Patent WO2011079005. 14674 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470574 nrnl1 Sequence 117 from Patent WO2011079005. 12229 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470575 nrnl1 Sequence 118 from Patent WO2011079005. 10767 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470576 nrnl1 Sequence 119 from Patent WO2011079005. 14648 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470590 nrnl1 Sequence 133 from Patent WO2011079005. 12223 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470591 nrnl1 Sequence 134 from Patent WO2011079005. 12223 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470599 nrnl1 Sequence 142 from Patent WO2011079005. 12231 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470600 nrnl1 Sequence 143 from Patent WO2011079005. 8628 bp unidentified QL-ELE-00-001 195 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.