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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 8017 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_JA393327 nrnl1 Sequence 166 from Patent WO2011062748. 11423 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA393328 nrnl1 Sequence 167 from Patent WO2011062748. 11159 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470488 nrnl1 Sequence 31 from Patent WO2011079005. 8293 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470492 nrnl1 Sequence 35 from Patent WO2011079005. 12262 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470493 nrnl1 Sequence 36 from Patent WO2011079005. 14769 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470494 nrnl1 Sequence 37 from Patent WO2011079005. 10712 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470499 nrnl1 Sequence 42 from Patent WO2011079005. 8229 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470506 nrnl1 Sequence 49 from Patent WO2011079005. 12189 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470507 nrnl1 Sequence 50 from Patent WO2011079005. 14692 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470508 nrnl1 Sequence 51 from Patent WO2011079005. 10683 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470509 nrnl1 Sequence 52 from Patent WO2011079005. 16321 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470510 nrnl1 Sequence 53 from Patent WO2011079005. 20290 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470511 nrnl1 Sequence 54 from Patent WO2011079005. 22797 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470512 nrnl1 Sequence 55 from Patent WO2011079005. 18740 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470513 nrnl1 Sequence 56 from Patent WO2011079005. 16257 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470514 nrnl1 Sequence 57 from Patent WO2011079005. 20217 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470515 nrnl1 Sequence 58 from Patent WO2011079005. 22720 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470516 nrnl1 Sequence 59 from Patent WO2011079005. 18711 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470517 nrnl1 Sequence 60 from Patent WO2011079005. 10875 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA470519 nrnl1 Sequence 62 from Patent WO2011079005. 14844 bp unidentified QL-ELE-00-001 195 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.