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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 8017 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_JA279492 nrnl1 Sequence 27 from Patent WO2011008510. 15156 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA279493 nrnl1 Sequence 28 from Patent WO2011008510. 16010 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA279571 nrnl1 Sequence 106 from Patent WO2011008510. 8392 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA279575 nrnl1 Sequence 110 from Patent WO2011008510. 8432 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA279581 nrnl1 Sequence 116 from Patent WO2011008510. 8452 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA279584 nrnl1 Sequence 119 from Patent WO2011008510. 15477 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA279587 nrnl1 Sequence 122 from Patent WO2011008510. 15480 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA279590 nrnl1 Sequence 125 from Patent WO2011008510. 15441 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA326462 nrnl1 Sequence 267 from Patent WO2011045333. 2800 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA381213 nrnl1 Sequence 13 from Patent EP2322636. 2186 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA393289 nrnl1 Sequence 128 from Patent WO2011062748. 8756 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA393292 nrnl1 Sequence 131 from Patent WO2011062748. 11625 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA393295 nrnl1 Sequence 134 from Patent WO2011062748. 11622 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA393297 nrnl1 Sequence 136 from Patent WO2011062748. 11889 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA393314 nrnl1 Sequence 153 from Patent WO2011062748. 11582 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA393317 nrnl1 Sequence 156 from Patent WO2011062748. 11876 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA393322 nrnl1 Sequence 161 from Patent WO2011062748. 11612 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA393324 nrnl1 Sequence 163 from Patent WO2011062748. 8303 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA393325 nrnl1 Sequence 164 from Patent WO2011062748. 11169 bp unidentified QL-ELE-00-001 195 bp View
NRN_JA393326 nrnl1 Sequence 165 from Patent WO2011062748. 11129 bp unidentified QL-ELE-00-001 195 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.