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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 8017 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
AB608280.1 nt Gateway binary vector pGWB714 DNA, ... 12283 bp Gateway binary vector pGWB714 QL-ELE-00-001 195 bp View
AB608281.1 nt Gateway binary vector pGWB715 DNA, ... 12285 bp Gateway binary vector pGWB715 QL-ELE-00-001 195 bp View
AB608283.1 nt Gateway binary vector pGWB717 DNA, ... 12334 bp Gateway binary vector pGWB717 QL-ELE-00-001 195 bp View
AB608284.1 nt Gateway binary vector pGWB718 DNA, ... 12336 bp Gateway binary vector pGWB718 QL-ELE-00-001 195 bp View
AB608286.1 nt Gateway binary vector pGWB720 DNA, ... 12565 bp Gateway binary vector pGWB720 QL-ELE-00-001 195 bp View
AB608287.1 nt Gateway binary vector pGWB721 DNA, ... 12570 bp Gateway binary vector pGWB721 QL-ELE-00-001 195 bp View
AB608289.1 nt Gateway binary vector pGWB723 DNA, ... 12841 bp Gateway binary vector pGWB723 QL-ELE-00-001 195 bp View
AB608290.1 nt Gateway binary vector pGWB724 DNA, ... 12843 bp Gateway binary vector pGWB724 QL-ELE-00-001 195 bp View
AB608292.1 nt Gateway binary vector pGWB726 DNA, ... 12196 bp Gateway binary vector pGWB726 QL-ELE-00-001 195 bp View
AB608293.1 nt Gateway binary vector pGWB727 DNA, ... 12198 bp Gateway binary vector pGWB727 QL-ELE-00-001 195 bp View
AB608295.1 nt Gateway binary vector pGWB729 DNA, ... 12709 bp Gateway binary vector pGWB729 QL-ELE-00-001 195 bp View
AB608299.1 nt Gateway binary vector pGWB741 DNA, ... 12880 bp Gateway binary vector pGWB741 QL-ELE-00-001 195 bp View
AB608300.1 nt Gateway binary vector pGWB742 DNA, ... 12882 bp Gateway binary vector pGWB742 QL-ELE-00-001 195 bp View
AB608302.1 nt Gateway binary vector pGWB744 DNA, ... 12880 bp Gateway binary vector pGWB744 QL-ELE-00-001 195 bp View
AB608303.1 nt Gateway binary vector pGWB745 DNA, ... 12882 bp Gateway binary vector pGWB745 QL-ELE-00-001 195 bp View
AB608305.1 nt Gateway binary vector pGWB751 DNA, ... 12880 bp Gateway binary vector pGWB751 QL-ELE-00-001 195 bp View
AB608306.1 nt Gateway binary vector pGWB752 DNA, ... 12879 bp Gateway binary vector pGWB752 QL-ELE-00-001 195 bp View
AB608308.1 nt Gateway binary vector pGWB754 DNA, ... 12841 bp Gateway binary vector pGWB754 QL-ELE-00-001 195 bp View
AB608309.1 nt Gateway binary vector pGWB755 DNA, ... 12840 bp Gateway binary vector pGWB755 QL-ELE-00-001 195 bp View
AB608311.1 nt Gateway binary vector pGWB760 DNA, ... 12877 bp Gateway binary vector pGWB760 QL-ELE-00-001 195 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.