Amplicon details

Amplicon:

189 bp
1     ctgggaggcc aaggtatcta atcagccatc ccatttgtga tctttgtcag
51    tagatatgat acaacaactc gcggttgact tgcgccttct tggcggctta
101   tctgtctcag gggcagactc ccgtgttccc tcggatctcg acatgtctcc
151   ggagaggaga ccagttgaga ttaggccagc tacagcagc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY629236.1 nt Zea mays transgenic cultivar Bt11 p... 468 bp Zea mays QL-CON-00-003 189 bp View
AY629236.1 emblreltgn Zea mays transgenic cultivar Bt11 p... 468 bp Zea mays QL-CON-00-003 189 bp View
AR110602.1 emblrelpat Sequence 9 from patent US 6114608. 7378 bp unidentified QL-CON-00-003 189 bp View
AR151001.1 emblrelpat Sequence 9 from patent US 6229075. 7378 bp unidentified QL-CON-00-003 189 bp View
AR152424.1 emblrelpat Sequence 9 from patent US 6232533. 7378 bp unidentified QL-CON-00-003 189 bp View
AR184317.1 emblrelpat Sequence 9 from patent US 6342660. 7378 bp unidentified QL-CON-00-003 189 bp View
BD014472.1 emblrelpat JP 2001136983-A/14: Transgenic corn... 892 bp synthetic construct QL-CON-00-003 189 bp View
NRN_BD014472 nrnl1 Transgenic corn and method of detec... 892 bp unidentified QL-CON-00-003 189 bp View
AR152433.1 emblrelpat Sequence 9 from patent US 6232534. 7378 bp unidentified QL-CON-00-003 189 bp View
AR212558.1 emblrelpat Sequence 9 from patent US 6399860. 7378 bp unidentified QL-CON-00-003 189 bp View
AR342206.1 emblrelpat Sequence 9 from patent US 6573438. 7378 bp unidentified QL-CON-00-003 189 bp View
NRN_AR110602 nrnl1 Sequence 9 from patent US 6114608. ... 7378 bp unidentified QL-CON-00-003 189 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.