Match details
Record ID:
NRN_AR110602
Database:
nrnl1
Go to original record
Description:
Sequence 9 from patent US 6114608. Sequence 9 from patent US 6229075. Sequence 9 from patent US 6232533. Sequence 9 from patent US 6232534. Sequence 9 from patent US 6342660. Sequence 9 from patent US 6399860. Sequence 9 from patent US 6573438.
Taxon:
unidentified
Original size:
7378 bp
Patents:
US6114608 (lens , espacenet )
US6229075 (lens , espacenet )
US6229075 (lens , espacenet )
US6232533 (lens , espacenet )
US6232533 (lens , espacenet )
US6232534 (lens , espacenet )
US6232534 (lens , espacenet )
US6342660 (lens , espacenet )
US6342660 (lens , espacenet )
US6399860 (lens , espacenet )
US6399860 (lens , espacenet )
US6573438 (lens , espacenet )
US6573438 (lens , espacenet )
View other 32 matches for this record
Method:
QL-CON-00-003
Go to GMOMETHODS record
View in JRC GMO-Matrix
Description: Qualitative PCR method for detection of the junction between the intron 2 from the maize adh1 gene and the pat gene(ISO/FDIS 21569:2005).
Target: IVS2-pat
View other 11 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
4152
4340
+
189 bp
1 ctgggaggcc aaggtatcta atcagccatc ccatttgtga tctttgtcag
51 tagatatgat acaacaactc gcggttgact tgcgccttct tggcggctta
101 tctgtctcag gggcagactc ccgtgttccc tcggatctcg acatgtctcc
151 ggagaggaga ccagttgaga ttaggccagc tacagcagc
View other 11 matches with an identical amplicon
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
22 bp
0
0
1
22
7.94e-10
primerB
100.0
22 bp
0
0
189
168
7.94e-10
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.