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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1055 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_DD139997 nrnl1 BIOLUMINESCENT PLANTS AND METHODS O... 12304 bp unidentified QL-ELE-00-024 87 bp View
NRN_DL469839 nrnl1 REPRODUCTIVE ABLATION CONSTRUCTS. ... 10312 bp unidentified QL-ELE-00-024 87 bp View
NRN_DL469840 nrnl1 REPRODUCTIVE ABLATION CONSTRUCTS. ... 10312 bp unidentified QL-ELE-00-024 87 bp View
NRN_FB572992 nrnl1 Sequence 9 from Patent WO2006130436... 6466 bp unidentified QL-ELE-00-024 87 bp View
NRN_FB707509 nrnl1 Sequence 5 from Patent WO2007027777... 5480 bp unidentified QL-ELE-00-024 87 bp View
NRN_FW501722 nrnl1 ENHANCEMENT OF STRESS TOLERANCE IN ... 11078 bp unidentified QL-ELE-00-024 87 bp View
NRN_FW501723 nrnl1 ENHANCEMENT OF STRESS TOLERANCE IN ... 14947 bp unidentified QL-ELE-00-024 87 bp View
NRN_FW501728 nrnl1 ENHANCEMENT OF STRESS TOLERANCE IN ... 9833 bp unidentified QL-ELE-00-024 87 bp View
NRN_FW501729 nrnl1 ENHANCEMENT OF STRESS TOLERANCE IN ... 9833 bp unidentified QL-ELE-00-024 87 bp View
NRN_FZ417836 nrnl1 JP 2010538647-A/5: COMPOSITIONS AND... 7228 bp unidentified QL-ELE-00-024 87 bp View
NRN_FZ417837 nrnl1 JP 2010538647-A/6: COMPOSITIONS AND... 7222 bp unidentified QL-ELE-00-024 87 bp View
NRN_GM711646 nrnl1 Sequence 3 from Patent WO2008092935. 3561 bp unidentified QL-ELE-00-024 87 bp View
NRN_GN042880 nrnl1 Sequence 137 from Patent WO2009016202. 28346 bp unidentified QL-ELE-00-024 87 bp View
NRN_HB432197 nrnl1 Sequence 4818 from Patent WO2009073069. 8504 bp unidentified QL-ELE-00-024 87 bp View
NRN_HB976127 nrnl1 Sequence 5 from Patent WO2009102873... 7367 bp unidentified QL-ELE-00-024 87 bp View
NRN_HB976128 nrnl1 Sequence 6 from Patent WO2009102873... 9294 bp unidentified QL-ELE-00-024 87 bp View
NRN_HB976129 nrnl1 Sequence 7 from Patent WO2009102873... 7849 bp unidentified QL-ELE-00-024 87 bp View
NRN_HC086757 nrnl1 Sequence 35 from Patent WO2009133145. 26755 bp unidentified QL-ELE-00-024 87 bp View
NRN_HC086757 nrnl1 Sequence 35 from Patent WO2009133145. 26755 bp unidentified QL-ELE-00-024 87 bp View
NRN_HC185831 nrnl1 Sequence 94616 from Patent WO200913... 8504 bp unidentified QL-ELE-00-024 87 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.