Match details
Record ID:
NRN_HB976128
Database:
nrnl1
Go to original record
Description:
Sequence 6 from Patent WO2009102873. JP 2011512138-A/6: SOYBEAN PLANT AND SEED CORRESPONDING TO TRANSGENIC EVENT MON87769 AND METHODS FOR DETECTION THEREOF.
Taxon:
unidentified
Original size:
9294 bp
Patents:
WO2009102873 (lens , espacenet )
JP2011512138 (lens , espacenet )
View other 1 match for this record
View other 1054 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
7544
7630
+
87 bp
1 tttttattcg gttttcgcta tcgaactgtg aaatggaaat ggatggagaa
51 gagttaatga atgatatggt ccttttgttc attctca
View other 1026 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
23 bp
0
0
1
23
1.11e-10
primerB
100.0
26 bp
0
0
87
62
2.79e-12
probe
100.0
36 bp
0
0
60
25
1.09e-17
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.