Amplicon details

Amplicon:

220 bp
1     gacgtaaggg atgacgcaca atcccactat ccttcgcaag acccttcctc
51    tatataagga agttcatttc atttggagag gacagggtac ccctactgac
101   tatatagaga gtgtgtgtgc tgtgttttct cttttgtgtc gtagaattga
151   gtcgagtcat ggacaaatct gaatcaacca gtgctggtcg taaccatcga
201   cgtcgtcagt ccaagaatga  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
FJ467933.1 nt Carica papaya transgenic cultivar R... 15595 bp Carica papaya QL-CON-00-012 220 bp View
FJ467933.1 emblreltgn Carica papaya transgenic cultivar R... 15595 bp Carica papaya QL-CON-00-012 220 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.