Navigation path

Additional tools

  • Print version
  • Decrease text
  • Increase text

Match details


QL-ELE-00-004 Go to GMOMETHODS record
View in JRC GMO-Matrix
Description:Qualitative PCR method for detection of Cauliflower Mosaic Virus 35S promoter (Lipp et al.,2001). Targets:CaMV P-35S<--->CaMV P-35S
View other 9147 matches for this method


Database:nt Go to original record
Description:Gossypium hirsutum transgenic clone LLcotton25 phosphinothricin N-acetyltransferase gene, complete cds.
Taxon:Gossypium hirsutum
Original size:4644 bp
View other 15 matches for this record

Predicted amplification details:

Mismatches Gaps From To Strand Amplicon size
0 0 2962 3084 + 123


1     ccacgtcttc aaagcaagtg gattgatgtg acatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga 
View other 2961 matches with an identical amplicon

Primers alignment:

Primer/Probe % Identity Length Mismatches Gaps From To Score
primerA 100.000 21 0 0 1 21 1.84e-09
primerB 100.000 25 0 0 123 99 1.30e-11

For more information, see:
"JRC GMO-Amplicons: a collection of nucleic acid sequences related to genetically modified organisms." Database (Oxford). 2015 Sep 30;2015. link

NEW! Download a How-To guide: "Using the EURL GMFF online bioinformatics resources"

© European Union, 2015

The information above is provided "as is" without warranty of any kind, either express or implied, including, but not limited to, fitness for a particular purpose and absence of errors in the application. The entire risk as to the use, quality, and performance of the application is with the user. The EU will not be liable for any incidental, consequential, direct or indirect damages including but not limited to the loss of data, loss of profits, or any other financial loss arising from the use or inability to use the application.