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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown


2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed


3) Select database(s) *
GenBank nt section (NCBI)
ENA transgenic data class division (EMBL-EBI)
ENA patent data class division (EMBL-EBI)
Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches

* required field


Results : 12 amplicons



Amplicons found in the selected databases
Record ID Database Record description Record length Taxon Method Amplicon size Match details
AR110602.1 emblrelpat Sequence 9 from patent US 6114608. 7378 bp unidentified QL-CON-00-003 189 bp View
AR151001.1 emblrelpat Sequence 9 from patent US 6229075. 7378 bp unidentified QL-CON-00-003 189 bp View
AR152424.1 emblrelpat Sequence 9 from patent US 6232533. 7378 bp unidentified QL-CON-00-003 189 bp View
AR152433.1 emblrelpat Sequence 9 from patent US 6232534. 7378 bp unidentified QL-CON-00-003 189 bp View
AR184317.1 emblrelpat Sequence 9 from patent US 6342660. 7378 bp unidentified QL-CON-00-003 189 bp View
AR212558.1 emblrelpat Sequence 9 from patent US 6399860. 7378 bp unidentified QL-CON-00-003 189 bp View
AR342206.1 emblrelpat Sequence 9 from patent US 6573438. 7378 bp unidentified QL-CON-00-003 189 bp View
AY629236.1 nt Zea mays transgenic cultivar Bt11 p... 468 bp Zea mays QL-CON-00-003 189 bp View
AY629236.1 emblreltgn Zea mays transgenic cultivar Bt11 p... 468 bp Zea mays QL-CON-00-003 189 bp View
BD014472.1 emblrelpat JP 2001136983-A/14: Transgenic corn... 892 bp synthetic construct QL-CON-00-003 189 bp View
NRN_AR110602 nrnl1 Sequence 9 from patent US 6114608. ... 7378 bp unidentified QL-CON-00-003 189 bp View
NRN_BD014472 nrnl1 Transgenic corn and method of detec... 892 bp unidentified QL-CON-00-003 189 bp View

Related publications:

  • Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
  • Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.