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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1055 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
DI354021.1 emblrelpat KR 1020130086599-A/6: TRANSGENIC BR... 6126 bp synthetic construct QL-ELE-00-024 87 bp View
DI356798.1 emblrelpat KR 1020130035268-A/202: Plants with... 3536 bp synthetic construct QL-ELE-00-024 87 bp View
DI356835.1 emblrelpat KR 1020130035268-A/279: Plants with... 3419 bp synthetic construct QL-ELE-00-024 87 bp View
DI356836.1 emblrelpat KR 1020130035268-A/280: Plants with... 2490 bp synthetic construct QL-ELE-00-024 87 bp View
DI356855.1 emblrelpat KR 1020130035268-A/327: Plants with... 4175 bp synthetic construct QL-ELE-00-024 87 bp View
DI359621.1 emblrelpat KR 1020130028983-A/202: Plants with... 3536 bp synthetic construct QL-ELE-00-024 87 bp View
DI359658.1 emblrelpat KR 1020130028983-A/279: Plants with... 3419 bp synthetic construct QL-ELE-00-024 87 bp View
DI359659.1 emblrelpat KR 1020130028983-A/280: Plants with... 2490 bp synthetic construct QL-ELE-00-024 87 bp View
DI359678.1 emblrelpat KR 1020130028983-A/327: Plants with... 4175 bp synthetic construct QL-ELE-00-024 87 bp View
DI359897.1 emblrelpat KR 1020130026512-A/202: Plants with... 3536 bp synthetic construct QL-ELE-00-024 87 bp View
DI359934.1 emblrelpat KR 1020130026512-A/279: Plants with... 3419 bp synthetic construct QL-ELE-00-024 87 bp View
DI359935.1 emblrelpat KR 1020130026512-A/280: Plants with... 2490 bp synthetic construct QL-ELE-00-024 87 bp View
DI359954.1 emblrelpat KR 1020130026512-A/327: Plants with... 4175 bp synthetic construct QL-ELE-00-024 87 bp View
DI360173.1 emblrelpat KR 1020130039342-A/202: Plants with... 3536 bp synthetic construct QL-ELE-00-024 87 bp View
DI360210.1 emblrelpat KR 1020130039342-A/279: Plants with... 3419 bp synthetic construct QL-ELE-00-024 87 bp View
DI360211.1 emblrelpat KR 1020130039342-A/280: Plants with... 2490 bp synthetic construct QL-ELE-00-024 87 bp View
DI360230.1 emblrelpat KR 1020130039342-A/327: Plants with... 4175 bp synthetic construct QL-ELE-00-024 87 bp View
DI360449.1 emblrelpat KR 1020130028984-A/202: Plants with... 3536 bp synthetic construct QL-ELE-00-024 87 bp View
DI360486.1 emblrelpat KR 1020130028984-A/279: Plants with... 3419 bp synthetic construct QL-ELE-00-024 87 bp View
DI360487.1 emblrelpat KR 1020130028984-A/280: Plants with... 2490 bp synthetic construct QL-ELE-00-024 87 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.