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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1055 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
CS401512.1 emblrelpat Sequence 9 from Patent WO2006013072. 5047 bp synthetic construct QL-ELE-00-024 87 bp View
CS401582.1 emblrelpat Sequence 79 from Patent WO2006013072. 11152 bp synthetic construct QL-ELE-00-024 87 bp View
CS415723.1 emblrelpat Sequence 4 from Patent WO2006045829. 4308 bp synthetic construct QL-ELE-00-024 87 bp View
CS421031.1 emblrelpat Sequence 2 from Patent WO2006099249. 7794 bp synthetic construct QL-ELE-00-024 87 bp View
CS539255.1 emblrelpat Sequence 67 from Patent WO2006033708. 3523 bp synthetic construct QL-ELE-00-024 87 bp View
CS539255.1 emblrelpat Sequence 67 from Patent WO2006033708. 3523 bp synthetic construct QL-ELE-00-024 87 bp View
CS539256.1 emblrelpat Sequence 68 from Patent WO2006033708. 3158 bp synthetic construct QL-ELE-00-024 87 bp View
CS540635.1 emblrelpat Sequence 14 from Patent WO2007012576. 670 bp unidentified QL-ELE-00-024 87 bp View
CS630761.1 emblrelpat Sequence 5 from Patent WO2006058897. 2709 bp synthetic construct QL-ELE-00-024 87 bp View
CS644487.1 emblrelpat Sequence 89 from Patent WO2006060699. 662 bp synthetic construct QL-ELE-00-024 87 bp View
CS644530.1 emblrelpat Sequence 132 from Patent WO2006060699. 662 bp synthetic construct QL-ELE-00-024 87 bp View
CS644535.1 emblrelpat Sequence 137 from Patent WO2006060699. 662 bp synthetic construct QL-ELE-00-024 87 bp View
CS644539.1 emblrelpat Sequence 141 from Patent WO2006060699. 662 bp synthetic construct QL-ELE-00-024 87 bp View
CS644543.1 emblrelpat Sequence 145 from Patent WO2006060699. 662 bp synthetic construct QL-ELE-00-024 88 bp View
CS644548.1 emblrelpat Sequence 150 from Patent WO2006060699. 662 bp synthetic construct QL-ELE-00-024 87 bp View
CS644553.1 emblrelpat Sequence 155 from Patent WO2006060699. 662 bp synthetic construct QL-ELE-00-024 87 bp View
CS644607.1 emblrelpat Sequence 209 from Patent WO2006060699. 662 bp Populus deltoides QL-ELE-00-024 87 bp View
CS804764.1 emblrelpat Sequence 101 from Patent WO2007044115. 7129 bp unidentified QL-ELE-00-024 87 bp View
DD070085.1 emblrelpat JP 2004527256-A/7: Materials and Me... 1998 bp synthetic construct QL-ELE-00-024 87 bp View
DD139996.1 emblrelpat BIOLUMINESCENT PLANTS AND METHODS O... 12497 bp synthetic construct QL-ELE-00-024 87 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.