Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *

 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches

Gaps:
Mismatches:
* required field


Results : 1655 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MA129036.1 emblrelpat JP 2018500885-A/9: MATERIALS AND ME... 21639 bp synthetic construct QL-ELE-00-023 137 bp View
MA129266.1 emblrelpat JP 2018500885-A/239: MATERIALS AND ... 5600 bp synthetic construct QL-ELE-00-023 137 bp View
MA129295.1 emblrelpat JP 2018500885-A/268: MATERIALS AND ... 60074 bp synthetic construct QL-ELE-00-023 137 bp View
MA129295.1 emblrelpat JP 2018500885-A/268: MATERIALS AND ... 60074 bp synthetic construct QL-ELE-00-023 137 bp View
MA129296.1 emblrelpat JP 2018500885-A/269: MATERIALS AND ... 44910 bp synthetic construct QL-ELE-00-023 137 bp View
MA129296.1 emblrelpat JP 2018500885-A/269: MATERIALS AND ... 44910 bp synthetic construct QL-ELE-00-023 137 bp View
MA129297.1 emblrelpat JP 2018500885-A/270: MATERIALS AND ... 43757 bp synthetic construct QL-ELE-00-023 137 bp View
MA129297.1 emblrelpat JP 2018500885-A/270: MATERIALS AND ... 43757 bp synthetic construct QL-ELE-00-023 137 bp View
MA129305.1 emblrelpat JP 2018500885-A/278: MATERIALS AND ... 47800 bp synthetic construct QL-ELE-00-023 137 bp View
MA129305.1 emblrelpat JP 2018500885-A/278: MATERIALS AND ... 47800 bp synthetic construct QL-ELE-00-023 137 bp View
MA129306.1 emblrelpat JP 2018500885-A/279: MATERIALS AND ... 43773 bp synthetic construct QL-ELE-00-023 137 bp View
MA129306.1 emblrelpat JP 2018500885-A/279: MATERIALS AND ... 43773 bp synthetic construct QL-ELE-00-023 137 bp View
MA129314.1 emblrelpat JP 2018500885-A/287: MATERIALS AND ... 45777 bp synthetic construct QL-ELE-00-023 137 bp View
MA129314.1 emblrelpat JP 2018500885-A/287: MATERIALS AND ... 45777 bp synthetic construct QL-ELE-00-023 137 bp View
MA129315.1 emblrelpat JP 2018500885-A/288: MATERIALS AND ... 43720 bp synthetic construct QL-ELE-00-023 137 bp View
MA129315.1 emblrelpat JP 2018500885-A/288: MATERIALS AND ... 43720 bp synthetic construct QL-ELE-00-023 137 bp View
MA129323.1 emblrelpat JP 2018500885-A/296: MATERIALS AND ... 39620 bp synthetic construct QL-ELE-00-023 137 bp View
MA129323.1 emblrelpat JP 2018500885-A/296: MATERIALS AND ... 39620 bp synthetic construct QL-ELE-00-023 137 bp View
MA129324.1 emblrelpat JP 2018500885-A/297: MATERIALS AND ... 37487 bp synthetic construct QL-ELE-00-023 137 bp View
MA129324.1 emblrelpat JP 2018500885-A/297: MATERIALS AND ... 37487 bp synthetic construct QL-ELE-00-023 137 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.