European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1655 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LZ997810.1 emblrelpat JP 2017534293-A/287: MATERIALS AND ... 45777 bp synthetic construct QL-ELE-00-023 137 bp View
LZ997811.1 emblrelpat JP 2017534293-A/288: MATERIALS AND ... 43720 bp synthetic construct QL-ELE-00-023 137 bp View
LZ997811.1 emblrelpat JP 2017534293-A/288: MATERIALS AND ... 43720 bp synthetic construct QL-ELE-00-023 137 bp View
LZ997819.1 emblrelpat JP 2017534293-A/296: MATERIALS AND ... 39620 bp synthetic construct QL-ELE-00-023 137 bp View
LZ997819.1 emblrelpat JP 2017534293-A/296: MATERIALS AND ... 39620 bp synthetic construct QL-ELE-00-023 137 bp View
LZ997820.1 emblrelpat JP 2017534293-A/297: MATERIALS AND ... 37487 bp synthetic construct QL-ELE-00-023 137 bp View
LZ997820.1 emblrelpat JP 2017534293-A/297: MATERIALS AND ... 37487 bp synthetic construct QL-ELE-00-023 137 bp View
LZ997823.1 emblrelpat JP 2017534293-A/300: MATERIALS AND ... 5600 bp synthetic construct QL-ELE-00-023 137 bp View
MA129028.1 emblrelpat JP 2018500885-A/1: MATERIALS AND ME... 60097 bp synthetic construct QL-ELE-00-023 137 bp View
MA129028.1 emblrelpat JP 2018500885-A/1: MATERIALS AND ME... 60097 bp synthetic construct QL-ELE-00-023 137 bp View
MA129029.1 emblrelpat JP 2018500885-A/2: MATERIALS AND ME... 61102 bp synthetic construct QL-ELE-00-023 137 bp View
MA129029.1 emblrelpat JP 2018500885-A/2: MATERIALS AND ME... 61102 bp synthetic construct QL-ELE-00-023 137 bp View
MA129030.1 emblrelpat JP 2018500885-A/3: MATERIALS AND ME... 60074 bp synthetic construct QL-ELE-00-023 137 bp View
MA129030.1 emblrelpat JP 2018500885-A/3: MATERIALS AND ME... 60074 bp synthetic construct QL-ELE-00-023 137 bp View
MA129031.1 emblrelpat JP 2018500885-A/4: MATERIALS AND ME... 61092 bp synthetic construct QL-ELE-00-023 137 bp View
MA129031.1 emblrelpat JP 2018500885-A/4: MATERIALS AND ME... 61092 bp synthetic construct QL-ELE-00-023 137 bp View
MA129032.1 emblrelpat JP 2018500885-A/5: MATERIALS AND ME... 26802 bp synthetic construct QL-ELE-00-023 137 bp View
MA129033.1 emblrelpat JP 2018500885-A/6: MATERIALS AND ME... 30687 bp synthetic construct QL-ELE-00-023 137 bp View
MA129034.1 emblrelpat JP 2018500885-A/7: MATERIALS AND ME... 24750 bp synthetic construct QL-ELE-00-023 137 bp View
MA129035.1 emblrelpat JP 2018500885-A/8: MATERIALS AND ME... 21523 bp synthetic construct QL-ELE-00-023 137 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.