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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown


2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed


3) Select database(s) *
GenBank nt section (NCBI)
ENA transgenic data class division (EMBL-EBI)
ENA patent data class division (EMBL-EBI)
Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches

* required field


Results : 266 amplicons



Amplicons found in the selected databases
Record ID Database Record description Record length Taxon Method Amplicon size Match details
HL943847.1 emblrelpat Sequence 13 from patent US 9404119. 5606 bp unidentified QL-CON-00-015 136 bp View
HL943848.1 emblrelpat Sequence 14 from patent US 9404119. 6464 bp unidentified QL-CON-00-015 136 bp View
HQ233646.1 nt Gossypium hirsutum transgenic clone... 4644 bp Gossypium hirsutum QL-CON-00-015 136 bp View
HQ233646.1 emblreltgn Gossypium hirsutum transgenic clone... 4644 bp Gossypium hirsutum QL-CON-00-015 136 bp View
HV200032.1 emblrelpat JP 2000509612-A/1: Improved transfo... 2345 bp unidentified QL-CON-00-015 136 bp View
HV532523.1 emblrelpat JP 2011177191-A/5: Improved targete... 5345 bp synthetic construct QL-CON-00-015 149 bp View
I33114.1 emblrelpat Sequence 5 from patent US 5589610. 6376 bp unidentified QL-CON-00-015 136 bp View
I47737.1 emblrelpat Sequence 9 from patent US 5639948. 5620 bp unidentified QL-CON-00-015 136 bp View
I49888.1 emblrelpat Sequence 4 from patent US 5641664. 4883 bp unidentified QL-CON-00-015 136 bp View
I70383.1 emblrelpat Sequence 1 from patent US 5679558. 4883 bp unidentified QL-CON-00-015 136 bp View
I82376.1 emblrelpat Sequence 4 from patent US 5712135. 4883 bp unidentified QL-CON-00-015 136 bp View
JB074725.1 emblrelpat Sequence 1 from Patent WO2012168124. 12641 bp synthetic construct QL-CON-00-015 154 bp View
JB074726.1 emblrelpat Sequence 2 from Patent WO2012168124. 12188 bp synthetic construct QL-CON-00-015 154 bp View
JD017425.1 emblrelpat Sequence 2 from Patent WO2014161821. 11344 bp synthetic construct QL-CON-00-015 149 bp View
JD017426.1 emblrelpat Sequence 3 from Patent WO2014161821. 11343 bp synthetic construct QL-CON-00-015 149 bp View
JD017427.1 emblrelpat Sequence 4 from Patent WO2014161821. 11340 bp synthetic construct QL-CON-00-015 149 bp View
JD017428.1 emblrelpat Sequence 5 from Patent WO2014161821. 11328 bp synthetic construct QL-CON-00-015 149 bp View
JD017429.1 emblrelpat Sequence 6 from Patent WO2014161821. 11290 bp synthetic construct QL-CON-00-015 149 bp View
JD017430.1 emblrelpat Sequence 7 from Patent WO2014161821. 1671 bp synthetic construct QL-CON-00-015 136 bp View
JD017431.1 emblrelpat Sequence 8 from Patent WO2014161821. 4618 bp synthetic construct QL-CON-00-015 149 bp View

Related publications:

  • Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
  • Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.