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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown


2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed


3) Select database(s) *
GenBank nt section (NCBI)
ENA transgenic data class division (EMBL-EBI)
ENA patent data class division (EMBL-EBI)
Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches

* required field


Results : 266 amplicons



Amplicons found in the selected databases
Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY346130.1 emblreltgn Zea mays transgenic clone pDE110 ph... 1115 bp Zea mays QL-CON-00-015 136 bp View
AY346130.1 nt Zea mays transgenic clone pDE110 ph... 1115 bp Zea mays QL-CON-00-015 136 bp View
BD013092.1 emblrelpat WO 2001024616-A/3: Method for produ... 5228 bp synthetic construct QL-CON-00-015 136 bp View
BD013094.1 emblrelpat WO 2001024616-A/5: Method for produ... 7492 bp synthetic construct QL-CON-00-015 136 bp View
BD069511.1 emblrelpat JP 2001511642-A/5: Improved BARSTAR... 5349 bp synthetic construct QL-CON-00-015 136 bp View
BD069514.1 emblrelpat JP 2001511642-A/8: Improved BARSTAR... 5611 bp synthetic construct QL-CON-00-015 136 bp View
BD074067.1 emblrelpat JP 2001514009-A/1: Improved Agrobac... 2345 bp synthetic construct QL-CON-00-015 136 bp View
BD242717.1 emblrelpat JP 2002528114-A/8: Glufosinate tole... 4161 bp synthetic construct QL-CON-00-015 103 bp View
CQ774407.1 emblrelpat Sequence 12 from Patent WO2004013169. 8514 bp synthetic construct QL-CON-00-015 136 bp View
CQ774408.1 emblrelpat Sequence 13 from Patent WO2004013169. 8692 bp synthetic construct QL-CON-00-015 136 bp View
CQ894856.1 emblrelpat Sequence 24 from Patent WO2004090140. 12987 bp synthetic construct QL-CON-00-015 136 bp View
CQ894857.1 emblrelpat Sequence 25 from Patent WO2004090140. 13226 bp synthetic construct QL-CON-00-015 136 bp View
CQ975581.1 emblrelpat Sequence 2 from Patent EP1496125. 6548 bp Plasmid PTS172 QL-CON-00-015 136 bp View
CQ975583.1 emblrelpat Sequence 4 from Patent EP1496125. 6291 bp Transformation vector pVE136 QL-CON-00-015 136 bp View
CS007934.1 emblrelpat Sequence 1 from Patent EP1502955. 12739 bp synthetic construct QL-CON-00-015 99 bp View
CS025573.1 emblrelpat Sequence 1 from Patent WO2005014827. 12739 bp synthetic construct QL-CON-00-015 99 bp View
CS104338.1 emblrelpat Sequence 6 from Patent WO2005049842. 5345 bp synthetic construct QL-CON-00-015 149 bp View
CS182458.1 emblrelpat Sequence 2 from Patent WO2005097999. 10870 bp Arabidopsis thaliana QL-CON-00-015 123 bp View
CS376391.1 emblrelpat Sequence 5 from Patent WO2006074956. 6082 bp synthetic construct QL-CON-00-015 136 bp View
CS376392.1 emblrelpat Sequence 6 from Patent WO2006074956. 6085 bp synthetic construct QL-CON-00-015 136 bp View

Related publications:

  • Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
  • Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.