Amplicon details

Amplicon:

570 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaagggcaat cctgagccaa atcctgtttt ccgaaaccaa aggttcagaa
151   agtgaaaaag ggataggtgc agagactcaa cggaagctgt tctaacaaat
201   ggagttagat gcattagtag aaagatcttt ccatcgaaaa ttcagaaaga
251   atgaagtgaa ggataaacgt atatacatac gtattgaata ctatatcaaa
301   tgattaatga cgacccgact gaatctgtat tttatatatg aaaaacggaa
351   gaattggtgt gaatagattc cacattgaag aaagaatcga atattcattg
401   atcaaatgat tcactccata gtctgataga tcttttcaag aactgattaa
451   tcggacgaga ataaagatag agtcccattc tacatgtcaa tgccggcaac
501   aatgaaattt atagtaagag gaaaatccgt cgacttttaa aatcgtgagg
551   gttcaagtcc ctctattccc  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AJ414549.1 nt Cephalanthus natalensis chloroplast... 1730 bp Cephalanthus natalensis QL-PLN-00-007 570 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.