Amplicon details

Amplicon:

579 bp
1     cgaaattggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acccactaag tgataacttt caaattcaga gaaaccctgg aattawtaam
101   aaagggcaat cctgagccaa atcctgtttt ccgaaaccaa aaggcaaagg
151   ttcagaaagt gaaaaaaggg ataggtgcag agactcaacg gaagctgttc
201   taacaaatgg agttagatgc attagtagag agatctttcc atcgaaaatt
251   cagaaagaat gaagtgaagg ataaacgtat atacatacgt attgaatact
301   atatcaaatg attaatgacg acccgactga atctgtattt ttatatatga
351   aaaacggaag aattggtgtg aatagattcc acattgaaga aagaatcgaa
401   tattcattga tcaaatgatt cactccatag tctgatagat cttctcaagn
451   actgattaat cggacgagaa taaagataga gtcccattct acatgtcaat
501   cgccgcaaca atgaaattta tagtaagagg aaaatccgtc gactttaaaa
551   atcgtgaggg ttcaagtccc tctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AJ414548.1 nt Adina pilulifera chloroplast trnT-L... 1731 bp Adina pilulifera QL-PLN-00-007 579 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.