Amplicon details

Amplicon:

572 bp
1     cgaaattggt agacgctacg gacttaattg aattgagcct tggtacggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   catgggcaat cctgagccaa atcctgtttt caaaaaacaa accaaggttc
151   aaaaagcaaa aataaaaaga aaggataggt gcagagactc aatggaagct
201   gttctaacaa atggagttga gtgtgttgtg ttagtagagg aatccttcta
251   tcgaaacttc agaaaggatg aagataaacg tatatacgta ttgaaatact
301   atatcaaatg attaatgaca acgcgaatct gtatttttct attaaaaagg
351   gaagaattcc tgtgaatcga ttccacattg aagaaagaat caaaattcat
401   tgatcaaatt attcactccg cagtctgata gatcttttga agaactgatt
451   aattagatga gaataaagat agagtcccgt tctacatgtc actaccggca
501   acaatgcaat ttatagtaag aggaaaatcc gtcgacctta gaaatcgtga
551   gggttcaagt ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AJ430898.1 nt Cardiopteris quinqueloba chloroplas... 1282 bp Cardiopteris quinqueloba QL-PLN-00-007 572 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.