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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 195 bp 
1     GCTCCTACAA ATGCCATCAT TGCGATAAAG GAAAGGCTAT CATTCAAGAT
51    CTCTCTGCCG ACAGTGGTCC CAAAGATGGA CCCCCACCCA CGAGGAGCAT
101   CGTGGAAAAA GAAGACGTTC CAACCACGTC TTCAAAGCAA GTGGATTGAT
151   GTGACATCTC CACTGACGTA AGGGATGACG CACAATCCCA CTATC

An identical amplicon is found in the following matches:

Amplicons found in the selected databases
Record ID Database Record description Record length Taxon Method Amplicon size Match details
HF951365.1 nt Boechera divaricarpa GSS, clone B62... 1162 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
HF951363.1 nt Boechera divaricarpa GSS, clone B62... 1145 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
HF950541.1 nt Boechera divaricarpa GSS, clone B53... 1175 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
HF949215.1 nt Boechera divaricarpa GSS, clone B25... 1170 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
HF950140.1 nt Boechera divaricarpa GSS, clone B53... 1199 bp Boechera divaricarpa QL-ELE-00-001 195 bp View
MK863361.1 nt Plant binary expression vector pNC-... 14252 bp Plant binary expression vector pNC-BiFC-VD3 QL-ELE-00-001 195 bp View
MK863360.1 nt Plant binary expression vector pNC-... 14255 bp Plant binary expression vector pNC-BiFC-VD2 QL-ELE-00-001 195 bp View
GX875356.1 emblrelpat Sequence 25 from patent US 7846718. 17458 bp unidentified QL-ELE-00-001 195 bp View
GX276568.1 emblrelpat Sequence 26 from patent US 7732660. 17681 bp unidentified QL-ELE-00-001 195 bp View
GY060019.1 emblrelpat Sequence 44 from patent US 7906325. 22635 bp unidentified QL-ELE-00-001 195 bp View
GY060019.1 emblrelpat Sequence 44 from patent US 7906325. 22635 bp unidentified QL-ELE-00-001 195 bp View
AR707154.1 emblrelpat Sequence 23 from patent US 6933146. 17862 bp unidentified QL-ELE-00-001 195 bp View
OR763841.1 nt Cloning vector pUQC10196, complete ... 6132 bp Cloning vector pUQC10196 QL-ELE-00-001 195 bp View
DD030672.1 emblrelpat JP 2004516852-A/23: Methods and mea... 17862 bp synthetic construct QL-ELE-00-001 195 bp View
DD448758.1 emblrelpat Methods and means for increasing th... 13226 bp synthetic construct QL-ELE-00-001 195 bp View
DI179665.1 emblrelpat KR 1020090007354-A/22: NOVEL NUCLEO... 5093 bp artificial sequences QL-ELE-00-001 195 bp View
DI398371.1 emblrelpat KR 1020140050602-A/282: METHOD FOR ... 4440 bp synthetic construct QL-ELE-00-001 195 bp View
FU758635.1 emblrelpat Novel nucleotide sequences encoding... 5093 bp unidentified QL-ELE-00-001 195 bp View
DQ231581.1 nt Gateway vector pFGCGW, complete seq... 14831 bp Gateway vector pFGCGW QL-ELE-00-001 195 bp View
KF876795.1 nt Binary vector pYBA-1131, complete s... 7651 bp Binary vector pYBA-1131 QL-ELE-00-001 195 bp View

Related publications:

  • Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
  • Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.