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QT-TAX-GM-007
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General information
| Tested in: |
Soybean
|
| Genetic target: | LE1 |
| Description: | Quantitative PCR method for detection of soybean lectin gene (LE1) (Shindo et al., 2002) |
| Comments: | Taxon-specific methods may generate amplicons with different sequence or length in different plant varieties. |
Method details
| Specificity: | Species specific |
| Analysis type: | Quantitative |
| Assay: | Real-time PCR (Simplex) |
| Amplicon sequence: |
GCCCTCTACTCCACCCCCATCCACATTTGGGACAAAGAAACCGGTAGCGTTGCCAGCTTCGCCGCTTCCTTCAACTTCAC CTTCTATGCCCCTGACACAAAAAGGCTTGCAGATGGGC Genbank ID: K00821 |
| Amplicon size: | 118 bp |
| Oligos: |
| Type | Name(s) | Sequence | Length | Target |
|---|---|---|---|---|
| Primer forward | Le1n02-5' / | GCCCTCTACTCCACCCCCA | 19 bp | LE1 |
| Primer reverse | Le1n02-3' / | GCCCATCTGCAAGCCTTTTT | 20 bp | LE1 |
| Probe | Le1-Taq / | FAM-AGCTTCGCCGCTTCCTTCAACTTCAC-TAMRA | 26 bp |