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QL-PLN-00-007
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General information
| Tested in: |
Potato
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| Genetic target: | trnL |
| Description: | Qualitative PCR method for detection of chloroplast tRNA-Leu (trnL) intron (ISO 21569:2005) |
| Comments: | Plant-specific methods may generate amplicons with different sequence or length in different plant species or plant varieties. |
Method details
| Specificity: | Plant specific |
| Analysis type: | Qualitative |
| Assay: | Endpoint PCR (Simplex) |
| Amplicon sequence: |
CGAAATCGGTAGACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTACTAAGTGATCACTTTCAAATTCAGA GAAACCCTGGAATTAACAAAAATGGGCAATCCTGAGCCAAATCCTGTTTTCTGAAAACAAACAAAGGTTCAGAAAAAAAG GATAGGTGCAGAGACTCAATGGAAGCTATTCTAACAAATGGAGTTAAATGCGTTGGTAGAGGACTCTTTACATCGAAACT TCAGAAAGAAAAAGAATGAAGTGAAGGATAAACGTATATACATACGTATTGAATACTATATCAAATGATTAATGACGACC CGAATCCGTAGTTTTTCTATAAAAAATCGAAGAATTGGTGTGAATCCATTCTACATTGAAGAAAGAATCGAATATTCATT GATCAAATCATTCACTCCATAGTCTGATAGATCTTTTGAAGAACTGATTAATCGGACGAGAATAAAGATAGAGTCCCGTT CTACATGTCAATACCGGCAACAATGAAATTTATAGTAAAAGGAAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC CCTCTATCCCC Genbank ID: DQ131549 |
| Amplicon size: | 571 bp |
| Oligos: |
| Type | Name(s) | Sequence | Length | Target |
|---|---|---|---|---|
| Primer forward | A1 / | CGAAATCGGTAGACGCTACG | 20 bp | trnL |
| Primer reverse | A2 / | GGGGATAGAGGGACTTGAAC | 20 bp | trnL |