Match details
Record ID: |
X83423.1 |
Database: |
nt |
Go to original record |
Description: |
P.capsici serine/threonine and tyrosine kinase genes |
Taxon: |
Phytophthora capsici |
Original size: |
2979 bp |
View other 6 matches for this record
View other 59426 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
1 |
1 |
563 |
774 |
- |
212 bp |
|
1 ctcaccttgc tcctgccgag aaagtatcca tgatggctga tgcaatgcgc
51 cgaaatcata cgcttgatcc gggtacctgc ccattcgacc accaacgtta
101 catcgcatcg agcgatcacc gtactcggat ggaagccggt cttgtcgatc
151 aggatgatct ggacgaagag catcaggcgt cgccagccga actgttcgcc
201 aggctgaagg ac
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
21 bp |
0 |
0 |
1 |
21 |
3.01e-09 |
primerB |
94.7 |
19 bp |
1 |
0 |
210 |
192 |
1.81e-06 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.